UHGV-0349280

Genome information

Genome length 35,271 bps

CDS count 54

Completeness 100.00% (complete)

geNomad score 0.9796

Prediction confidence Confident

Genome information
Genome ID	UHGV-0349280
vOTU ID	vOTU-050933
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k141_9576_round347~3459688
BioSample	SAMN06350371
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	29
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9796
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	68.16
Jumbo phage	No

Genome content
Genome length	35,271 bps
GC content	54.22%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	54
CDS density	91.94%
Average CDS length	602.72 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0349280_1	PHROG	phrog_34132	NA	unknown function
UHGV-0349280_1	eggNOG-mapper	633.DJ40_1485	Head binding	NA
UHGV-0349280_1	Pfam	PF09008	Head binding	Head_binding
UHGV-0349280_2	PHROG	phrog_6704	NA	unknown function
UHGV-0349280_2	UniRef90	UniRef90_UPI001CBEB423	lytic transglycosylase domain-containing protein	NA
UHGV-0349280_2	eggNOG-mapper	629265.PMA4326_09740	NA	NA
UHGV-0349280_3	PHROG	phrog_917	released from the phage upon host infection	other
UHGV-0349280_3	UniRef90	UniRef90_A0A5B9N459	DNA transfer protein	NA
UHGV-0349280_3	eggNOG-mapper	754331.AEME01000001_gene15	DNA/protein translocase of phage P22 injectosome	NA
UHGV-0349280_3	Pfam	PF16928	DNA/protein translocase of phage P22 injectosome	Inj_translocase
UHGV-0349280_3	COG	COG1835	Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains	NA
UHGV-0349280_3	Structural annotation	PF16928	NA	NA
UHGV-0349280_4	PHROG	phrog_598	DNA ejection	DNA, RNA and nucleotide metabolism
UHGV-0349280_4	UniRef90	UniRef90_A0A5B9N8P9	DNA transfer protein	NA
UHGV-0349280_4	eggNOG-mapper	642227.HA49_08600	NA	NA
UHGV-0349280_5	PHROG	phrog_17333	NA	unknown function
UHGV-0349280_5	eggNOG-mapper	642227.HA49_08595	NA	NA
UHGV-0349280_6	PHROG	phrog_1030	NA	unknown function
UHGV-0349280_6	UniRef90	UniRef90_A0A5B9N4W5	Packaged DNA stabilization protein	NA
UHGV-0349280_6	eggNOG-mapper	10761.Q716G6_BPSFV	Pfam:Phage_tail_NK	NA
UHGV-0349280_6	Pfam	PF16532	Sf6-type phage tail needle knob or tip of some Caudovirales	Phage_tail_NK
UHGV-0349280_6	Structural annotation	PF16532, NF033147	NA	NA
UHGV-0349280_7	PHROG	phrog_578	head closure Hc3	connector
UHGV-0349280_7	UniRef90	UniRef90_UPI001F2E1C74	packaged DNA stabilization protein gp10	NA
UHGV-0349280_7	eggNOG-mapper	521000.PROVRETT_06013	Packaged DNA stabilization protein gp10	NA
UHGV-0349280_7	Pfam	PF11134	Phage stabilisation protein	Phage_stabilise
UHGV-0349280_7	Structural annotation	PF11134, MF_01282, NF000022, NF038128, COG3292	NA	NA
UHGV-0349280_8	PHROG	phrog_7880	NA	unknown function
UHGV-0349280_8	eggNOG-mapper	330084.JNYZ01000003_gene2313	NA	NA
UHGV-0349280_10	PHROG	phrog_637	head-tail adaptor Ad3	connector
UHGV-0349280_10	UniRef90	UniRef90_A0A0T9UKT4	p22 tail accessory factor	NA
UHGV-0349280_10	eggNOG-mapper	754331.AEME01000001_gene10	Packaged DNA stabilization protein gp4	NA
UHGV-0349280_10	Pfam	PF11650	P22 tail accessory factor	P22_Tail-4
UHGV-0349280_10	Structural annotation	PF11650	NA	NA
UHGV-0349280_11	PHROG	phrog_36993	NA	unknown function
UHGV-0349280_13	PHROG	phrog_717	NA	unknown function
UHGV-0349280_13	eggNOG-mapper	1397284.AYMN01000002_gene2281	NA	NA
UHGV-0349280_13	dbAPIS	APIS004	Anti-CBASS protein ("Acb2") that forms a hexamer with three 3',3'-cGAMP molecules and reduces phospholipase activity.	NA
UHGV-0349280_14	UniRef90	UniRef90_A0A5B9N452	EF-hand domain-containing protein	NA
UHGV-0349280_15	PHROG	phrog_283	major head protein	head and packaging
UHGV-0349280_15	UniRef90	UniRef90_A0A2S4QD99	Head protein	NA
UHGV-0349280_15	eggNOG-mapper	630626.EBL_c21750	P22 coat protein - gene protein 5	NA
UHGV-0349280_15	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0349280_16	PHROG	phrog_648	head scaffolding protein	head and packaging
UHGV-0349280_16	UniRef90	UniRef90_UPI001378DC94	scaffolding protein	NA
UHGV-0349280_16	eggNOG-mapper	754331.AEME01000001_gene7	NA	NA
UHGV-0349280_16	Structural annotation	PF09306	NA	NA
UHGV-0349280_17	PHROG	phrog_156	portal protein	head and packaging
UHGV-0349280_17	UniRef90	UniRef90_A0A427UR32	Portal protein	NA
UHGV-0349280_17	eggNOG-mapper	1524881.A0A088CQ69_9CAUD	actin binding	NA
UHGV-0349280_17	Pfam	PF16510	Phage P22-like portal protein	P22_portal
UHGV-0349280_17	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0349280_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0349280_18	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0349280_18	UniRef90	UniRef90_A0A5B9NBY1	Terminase	NA
UHGV-0349280_18	eggNOG-mapper	1414766.A0A0A0P0H4_9VIRU	Phage terminase large subunit	NA
UHGV-0349280_18	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0349280_18	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0349280_19	PHROG	phrog_9747	NA	unknown function
UHGV-0349280_24	PHROG	phrog_13871	NA	unknown function
UHGV-0349280_25	PHROG	phrog_6022	NA	unknown function
UHGV-0349280_25	eggNOG-mapper	1073754.G0ZNC5_9VIRU	NA	NA
UHGV-0349280_26	PHROG	phrog_2227	NA	unknown function
UHGV-0349280_26	NCBIFam	NF033650.1	ANR family transcriptional regulator	NA
UHGV-0349280_27	PHROG	phrog_16803	NA	unknown function
UHGV-0349280_28	PHROG	phrog_171	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0349280_28	UniRef90	UniRef90_A0A4Y5TXV1	Protein ninG	NA
UHGV-0349280_28	eggNOG-mapper	1127514.H9C0U0_9CAUD	Bacteriophage Lambda NinG protein	NA
UHGV-0349280_28	Pfam	PF05766	Bacteriophage Lambda NinG protein	NinG
UHGV-0349280_28	Structural annotation	PF05766	NA	NA
UHGV-0349280_29	PHROG	phrog_7704	NA	unknown function
UHGV-0349280_29	UniRef90	UniRef90_UPI0018DDCCBA	NA	NA
UHGV-0349280_29	Pfam	PF04448	NA	DUF551
UHGV-0349280_29	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0349280_29	Structural annotation	PF04448	NA	NA
UHGV-0349280_30	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0349280_30	UniRef90	UniRef90_A0A514TUA9	ANT domain-containing protein	NA
UHGV-0349280_30	eggNOG-mapper	1127514.H9C0T8_9CAUD	DNA binding	NA
UHGV-0349280_30	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0349280_30	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0349280_30	Structural annotation	PF03374, PF09669, TIGR02681, COG3645, COG3561	NA	NA
UHGV-0349280_31	PHROG	phrog_343	NA	unknown function
UHGV-0349280_33	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0349280_33	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0349280_33	UniRef90	UniRef90_A0A5J6TWX9	DNA helicase	NA
UHGV-0349280_33	eggNOG-mapper	406818.XBJ1_1190	DNA helicase	NA
UHGV-0349280_33	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0349280_33	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0349280_33	COG	COG0305	Replicative DNA helicase	NA
UHGV-0349280_33	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0349280_34	PHROG	phrog_20981	NA	unknown function
UHGV-0349280_34	UniRef90	UniRef90_A0A2I7RTS8	NA	NA
UHGV-0349280_34	eggNOG-mapper	232721.Ajs_0930	NA	NA
UHGV-0349280_34	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0349280_36	UniRef90	UniRef90_A0A5B9N478	HTH cro/C1-type domain-containing protein	NA
UHGV-0349280_36	eggNOG-mapper	1127514.H9C0S2_9CAUD	protein disulfide oxidoreductase activity	NA
UHGV-0349280_36	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0349280_36	Structural annotation	PF13443, NF041951, COG1476	NA	NA
UHGV-0349280_39	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0349280_39	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0349280_39	UniRef90	UniRef90_A0A5B9N4Y4	Putative RecT recombination protein	NA
UHGV-0349280_39	eggNOG-mapper	1127514.H9C0R8_9CAUD	DNA metabolic process	NA
UHGV-0349280_39	Pfam	PF03837	RecT family	RecT
UHGV-0349280_39	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0349280_39	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0349280_40	KOfam	K01143	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	NA
UHGV-0349280_40	PHROG	phrog_149	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0349280_40	UniRef90	UniRef90_A0A219YBA9	Exonuclease	NA
UHGV-0349280_40	eggNOG-mapper	1127514.H9C0R7_9CAUD	exonuclease activity	NA
UHGV-0349280_40	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0349280_40	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0349280_41	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0349280_41	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0349280_41	UniRef90	UniRef90_H9C0R6	Single-stranded DNA-binding protein	NA
UHGV-0349280_41	eggNOG-mapper	1127514.H9C0R6_9CAUD	Single-strand binding protein family	NA
UHGV-0349280_41	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0349280_41	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0349280_41	Structural annotation	PF00436, MF_00984, NF006445, COG0629	NA	NA
UHGV-0349280_42	PHROG	phrog_2340	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0349280_42	UniRef90	UniRef90_A0A3G8F2U5	Putative recombinase	NA
UHGV-0349280_42	eggNOG-mapper	1414766.A0A0A0P0H0_9VIRU	NA	NA
UHGV-0349280_42	Structural annotation	PF18275	NA	NA
UHGV-0349280_47	PHROG	phrog_111	DNA methyltransferase	other
UHGV-0349280_47	UniRef90	UniRef90_A0A5B9N8Q8	Putative Dam methylase	NA
UHGV-0349280_47	eggNOG-mapper	1046714.AMRX01000006_gene3148	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-0349280_47	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0349280_47	Structural annotation	PF05869, MF_03187, TIGR01712, COG2263	NA	NA
UHGV-0349280_48	PHROG	phrog_5781	NA	unknown function
UHGV-0349280_48	UniRef90	UniRef90_A0A2S4U8Q1	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0349280_48	eggNOG-mapper	1127514.H9C0Q9_9CAUD	NA	NA
UHGV-0349280_48	Pfam	PF14359	NA	DUF4406
UHGV-0349280_48	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0349280_49	PHROG	phrog_20561	NA	unknown function
UHGV-0349280_49	eggNOG-mapper	1236000.L0ASW7_9CAUD	NA	NA
UHGV-0349280_53	PHROG	phrog_315	endolysin	lysis
UHGV-0349280_53	UniRef90	UniRef90_UPI000559541E	secretion activator protein	NA
UHGV-0349280_53	eggNOG-mapper	1244856.K4PXD6_9CAUD	Glycosyl hydrolase 108	NA
UHGV-0349280_53	Pfam	PF05838	Glycosyl hydrolase 108	Glyco_hydro_108
UHGV-0349280_53	Structural annotation	PF05838, PF09374, NF040573, COG3926	NA	NA
UHGV-0349280_54	PHROG	phrog_1544	NA	unknown function
UHGV-0349280_54	UniRef90	UniRef90_A0A899IPU3	TMhelix containing protein	NA
UHGV-0349280_54	eggNOG-mapper	1121935.AQXX01000137_gene3966	NA	NA