| UHGV-0352720_1 | KOfam | K01356 | lexA; repressor LexA [EC:3.4.21.88] | NA |
| UHGV-0352720_1 | PHROG | phrog_4 | transcriptional repressor | transcription regulation |
| UHGV-0352720_1 | UniRef90 | UniRef90_A0A349YNZ0 | LexA family transcriptional regulator | NA |
| UHGV-0352720_1 | eggNOG-mapper | 1273103.NM10_06896 | Peptidase S24-like | NA |
| UHGV-0352720_1 | Pfam | PF01381 | Helix-turn-helix | HTH_3 |
| UHGV-0352720_1 | Pfam | PF00717 | Peptidase S24-like | Peptidase_S24 |
| UHGV-0352720_1 | COG | COG1974 | SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) | NA |
| UHGV-0352720_1 | Structural annotation | PF01381, PF00717, MF_00015, NF041951, COG1396 | NA | NA |
| UHGV-0352720_2 | PHROG | phrog_14367 | NA | unknown function |
| UHGV-0352720_2 | UniRef90 | UniRef90_E4L8C9 | LysM domain-containing protein | NA |
| UHGV-0352720_2 | eggNOG-mapper | 479436.Vpar_0935 | LysM domain | NA |
| UHGV-0352720_2 | Pfam | PF01476 | LysM domain | LysM |
| UHGV-0352720_2 | COG | COG3170 | Type IV pilus assembly protein FimV | NA |
| UHGV-0352720_2 | Structural annotation | MF_02014, NF010723, COG1388 | NA | NA |
| UHGV-0352720_3 | KOfam | K07727 | K07727; putative transcriptional regulator | NA |
| UHGV-0352720_3 | UniRef90 | UniRef90_UPI001BE45530 | helix-turn-helix domain-containing protein | NA |
| UHGV-0352720_3 | eggNOG-mapper | 511437.Lbuc_0021 | Cro/C1-type HTH DNA-binding domain | NA |
| UHGV-0352720_3 | Pfam | PF13443 | Cro/C1-type HTH DNA-binding domain | HTH_26 |
| UHGV-0352720_3 | COG | COG3655 | DNA-binding transcriptional regulator, XRE family | NA |
| UHGV-0352720_3 | Structural annotation | PF13443, MF_00535, NF041951, COG3655 | NA | NA |
| UHGV-0352720_4 | KOfam | K07727 | K07727; putative transcriptional regulator | NA |
| UHGV-0352720_4 | PHROG | phrog_38620 | transcriptional regulator | transcription regulation |
| UHGV-0352720_4 | UniRef90 | UniRef90_A0A6N7YDL3 | Helix-turn-helix transcriptional regulator | NA |
| UHGV-0352720_4 | eggNOG-mapper | 511437.Lbuc_0021 | Cro/C1-type HTH DNA-binding domain | NA |
| UHGV-0352720_4 | Pfam | PF13443 | Cro/C1-type HTH DNA-binding domain | HTH_26 |
| UHGV-0352720_4 | COG | COG3655 | DNA-binding transcriptional regulator, XRE family | NA |
| UHGV-0352720_7 | PHROG | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_7 | UniRef90 | UniRef90_E4LA68 | Siphovirus Gp157 | NA |
| UHGV-0352720_7 | eggNOG-mapper | 910314.HMPREF9220_0635 | Siphovirus Gp157 | NA |
| UHGV-0352720_7 | Pfam | PF05565 | Siphovirus Gp157 | Sipho_Gp157 |
| UHGV-0352720_7 | Structural annotation | PF05565 | NA | NA |
| UHGV-0352720_8 | PHROG | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_8 | UniRef90 | UniRef90_UPI0002FC129A | ERF family protein | NA |
| UHGV-0352720_8 | eggNOG-mapper | 1118057.CAGX01000020_gene1653 | ERF superfamily | NA |
| UHGV-0352720_8 | Pfam | PF04404 | ERF superfamily | ERF |
| UHGV-0352720_8 | Structural annotation | PF04404, TIGR00607, COG4712 | NA | NA |
| UHGV-0352720_9 | PHROG | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_9 | UniRef90 | UniRef90_A0A8D9PDS2 | NinB protein | NA |
| UHGV-0352720_9 | eggNOG-mapper | 445972.ANACOL_01825 | NA | NA |
| UHGV-0352720_9 | Structural annotation | PF05772 | NA | NA |
| UHGV-0352720_10 | KOfam | K07451 | mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] | NA |
| UHGV-0352720_10 | UniRef90 | UniRef90_A0A2S0M9D0 | HNHc domain-containing protein | NA |
| UHGV-0352720_10 | Pfam | PF01844 | HNH endonuclease | HNH |
| UHGV-0352720_10 | COG | COG1403 | 5-methylcytosine-specific restriction endonuclease McrA | NA |
| UHGV-0352720_10 | Structural annotation | PF01844, COG1403 | NA | NA |
| UHGV-0352720_11 | PHROG | phrog_7882 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_11 | eggNOG-mapper | 689781.AUJX01000003_gene2834 | Replication initiator protein A (RepA) N-terminus | NA |
| UHGV-0352720_11 | Pfam | PF06970 | Replication initiator protein A (RepA) N-terminus | RepA_N |
| UHGV-0352720_11 | Structural annotation | PF06970, MF_01819, NF040939, COG3355 | NA | NA |
| UHGV-0352720_12 | KOfam | K02315 | dnaC; DNA replication protein DnaC | NA |
| UHGV-0352720_12 | PHROG | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_12 | UniRef90 | UniRef90_UPI0018C52061 | ATP-binding protein | NA |
| UHGV-0352720_12 | eggNOG-mapper | 1345695.CLSA_c04170 | PFAM IstB-like ATP binding protein | NA |
| UHGV-0352720_12 | Pfam | PF01695 | IstB-like ATP binding protein | IstB_IS21 |
| UHGV-0352720_12 | COG | COG1484 | DNA replication protein DnaC | NA |
| UHGV-0352720_12 | Structural annotation | PF01695, MF_01158, NF005378, COG1484 | NA | NA |
| UHGV-0352720_13 | Structural annotation | PF13560, COG1476 | NA | NA |
| UHGV-0352720_14 | KOfam | K03111 | ssb; single-strand DNA-binding protein | NA |
| UHGV-0352720_14 | PHROG | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_14 | UniRef90 | UniRef90_A0A6M3LYJ1 | Putative single-stranded DNA-binding protein | NA |
| UHGV-0352720_14 | eggNOG-mapper | 699218.HMPREF0889_0638 | Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism | NA |
| UHGV-0352720_14 | Pfam | PF00436 | Single-strand binding protein family | SSB |
| UHGV-0352720_14 | NCBIFam | TIGR00621.2 | single-stranded DNA-binding protein | NA |
| UHGV-0352720_14 | COG | COG0629 | Single-stranded DNA-binding protein | NA |
| UHGV-0352720_14 | HAMAP | MF_00984 | Single-stranded DNA-binding protein | NA |
| UHGV-0352720_14 | Structural annotation | PF00436, MF_00984, NF005242, COG0629 | NA | NA |
| UHGV-0352720_15 | PHROG | phrog_379 | DNA binding protein | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_15 | Pfam | PF00216 | Bacterial DNA-binding protein | Bac_DNA_binding |
| UHGV-0352720_15 | Structural annotation | PF00216, MF_00380, NF001222, COG0776 | NA | NA |
| UHGV-0352720_18 | KOfam | K01160 | rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] | NA |
| UHGV-0352720_18 | PHROG | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_18 | UniRef90 | UniRef90_UPI00189AEAC4 | RusA family crossover junction endodeoxyribonuclease | NA |
| UHGV-0352720_18 | eggNOG-mapper | 910314.HMPREF9220_1104 | Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC | NA |
| UHGV-0352720_18 | COG | COG4570 | Holliday junction resolvase RusA (prophage-encoded endonuclease) | NA |
| UHGV-0352720_23 | PHROG | phrog_236 | nucleotide kinase | other |
| UHGV-0352720_23 | eggNOG-mapper | 447909.A6M9A0_9VIRU | NA | NA |
| UHGV-0352720_23 | Pfam | PF11753 | NA | DUF3310 |
| UHGV-0352720_23 | Structural annotation | PF11753, PF02559 | NA | NA |
| UHGV-0352720_29 | PHROG | phrog_11947 | NA | unknown function |
| UHGV-0352720_33 | KOfam | K01520 | dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23] | NA |
| UHGV-0352720_33 | PHROG | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_33 | UniRef90 | UniRef90_Q3AFB3 | Deoxyuridine 5`-triphosphate nucleotidohydrolase | NA |
| UHGV-0352720_33 | eggNOG-mapper | 246194.CHY_0300 | dUTP diphosphatase | NA |
| UHGV-0352720_33 | Pfam | PF00692 | dUTPase | dUTPase |
| UHGV-0352720_33 | NCBIFam | TIGR00576.1 | dUTP diphosphatase | NA |
| UHGV-0352720_33 | COG | COG0756 | dUTP pyrophosphatase (dUTPase) | NA |
| UHGV-0352720_33 | Structural annotation | PF00692, MF_00116, NF010561, COG0756 | NA | NA |
| UHGV-0352720_34 | eggNOG-mapper | 401526.TcarDRAFT_1279 | phage transcriptional regulator, RinA family | NA |
| UHGV-0352720_34 | Structural annotation | PF08281, TIGR01636, COG2739 | NA | NA |
| UHGV-0352720_38 | KOfam | K03630 | radC; DNA repair protein RadC | NA |
| UHGV-0352720_38 | PHROG | phrog_10276 | DNA repair protein | DNA, RNA and nucleotide metabolism |
| UHGV-0352720_38 | UniRef90 | UniRef90_A0A3B9DWM7 | MPN domain-containing protein | NA |
| UHGV-0352720_38 | eggNOG-mapper | 742743.HMPREF9453_00669 | Belongs to the UPF0758 family | NA |
| UHGV-0352720_38 | Pfam | PF04002 | RadC-like JAB domain | RadC |
| UHGV-0352720_38 | NCBIFam | TIGR00608.1 | DNA repair protein RadC | NA |
| UHGV-0352720_38 | COG | COG2003 | DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif | NA |
| UHGV-0352720_38 | Structural annotation | PF04002, MF_00018, NF000642, COG2003 | NA | NA |
| UHGV-0352720_42 | Structural annotation | PF20075, TIGR02612 | NA | NA |
| UHGV-0352720_43 | PHROG | phrog_606 | terminase small subunit | head and packaging |
| UHGV-0352720_43 | eggNOG-mapper | 945021.TEH_08580 | transposase activity | NA |
| UHGV-0352720_43 | Pfam | PF16677 | DNA-packaging protein gp3 | GP3_package |
| UHGV-0352720_43 | COG | COG2963 | Transposase InsE and inactivated derivatives | NA |
| UHGV-0352720_43 | Structural annotation | PF16677 | NA | NA |
| UHGV-0352720_45 | Structural annotation | PF10263 | NA | NA |
| UHGV-0352720_46 | eggNOG-mapper | 1122962.AULH01000007_gene1840 | homologous to membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) (Murein hydrolase C) of E. coli (P52066) | NA |
| UHGV-0352720_46 | COG | COG0741 | Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain) | NA |
| UHGV-0352720_48 | PHROG | phrog_2 | terminase large subunit | head and packaging |
| UHGV-0352720_48 | UniRef90 | UniRef90_A0A1E3XGX2 | TerL | NA |
| UHGV-0352720_48 | eggNOG-mapper | 1232428.CAVO010000067_gene427 | DNA packaging | NA |
| UHGV-0352720_48 | Pfam | PF03237 | Terminase large subunit, T4likevirus-type, N-terminal | Terminase_6N |
| UHGV-0352720_48 | COG | COG1783 | Phage terminase large subunit | NA |
| UHGV-0352720_48 | Structural annotation | PF03354, PF17289, MF_04146, TIGR01547, COG4373 | NA | NA |
| UHGV-0352720_49 | PHROG | phrog_1216 | portal protein | head and packaging |
| UHGV-0352720_49 | UniRef90 | UniRef90_A0A0U1L376 | Phage portal protein | NA |
| UHGV-0352720_49 | eggNOG-mapper | 1232428.CAVO010000067_gene425 | Membrane | NA |
| UHGV-0352720_49 | COG | COG3064 | Membrane protein TolA involved in colicin uptake | NA |
| UHGV-0352720_49 | Structural annotation | PF16510, MF_04120, TIGR01538, COG4383 | NA | NA |
| UHGV-0352720_51 | eggNOG-mapper | 1485543.JMME01000020_gene789 | NA | NA |
| UHGV-0352720_52 | PHROG | phrog_1328 | major head protein | head and packaging |
| UHGV-0352720_52 | UniRef90 | UniRef90_UPI000413677B | NA | NA |
| UHGV-0352720_52 | eggNOG-mapper | 1232428.CAVO010000067_gene423 | NA | NA |
| UHGV-0352720_52 | Pfam | PF17236 | NA | DUF5309 |
| UHGV-0352720_52 | Structural annotation | PF17236, MF_04133, NF033394, COG4834 | NA | NA |
| UHGV-0352720_54 | Structural annotation | PF20387 | NA | NA |
| UHGV-0352720_55 | eggNOG-mapper | 1485543.JMME01000020_gene785 | NA | NA |
| UHGV-0352720_55 | Structural annotation | PF20387 | NA | NA |
| UHGV-0352720_56 | eggNOG-mapper | 1232428.CAVO010000067_gene421 | cellulase activity | NA |
| UHGV-0352720_56 | COG | COG4733 | Phage-related protein, tail protein J | NA |
| UHGV-0352720_56 | Structural annotation | PF18001, PF01828, PF16389, MF_01905, NF010681, COG3401, COG3506 | NA | NA |
| UHGV-0352720_57 | PHROG | phrog_5417 | NA | unknown function |
| UHGV-0352720_57 | UniRef90 | UniRef90_H8FY63 | Putative BcepGomrgp18 | NA |
| UHGV-0352720_57 | eggNOG-mapper | 1459636.NTE_01434 | NA | NA |
| UHGV-0352720_57 | Structural annotation | PF12571 | NA | NA |
| UHGV-0352720_58 | Structural annotation | NF012201 | NA | NA |
| UHGV-0352720_60 | eggNOG-mapper | 936573.HMPREF1147_1352 | NA | NA |
| UHGV-0352720_61 | KOfam | K07273 | acm; lysozyme | NA |
| UHGV-0352720_61 | PHROG | phrog_291 | endolysin | lysis |
| UHGV-0352720_61 | UniRef90 | UniRef90_R6AN85 | Lyzozyme M1 (1 4-beta-N-acetylmuramidase) | NA |
| UHGV-0352720_61 | eggNOG-mapper | 1273103.NM10_01741 | Glycosyl hydrolase family 25 | NA |
| UHGV-0352720_61 | Pfam | PF01183 | Glycosyl hydrolases family 25 | Glyco_hydro_25 |
| UHGV-0352720_61 | COG | COG3757 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family | NA |
| UHGV-0352720_61 | Structural annotation | PF01183, NF008377, COG3757 | NA | NA |
| UHGV-0352720_63 | PHROG | phrog_2631 | tail fiber protein | tail |
| UHGV-0352720_63 | UniRef90 | UniRef90_UPI001CA54CD7 | phage tail protein | NA |
| UHGV-0352720_63 | eggNOG-mapper | 561231.Pecwa_2885 | aa, and to Salmonella typhi bacteriophage tail fiber protein sty1637 SWALL Q8Z6S9 (EMBL AL627270) (341 aa) fasta scores E() | NA |
| UHGV-0352720_63 | COG | COG4675 | Phage tail collar domain | NA |
| UHGV-0352720_66 | KOfam | K14059 | int; integrase | NA |
| UHGV-0352720_66 | PHROG | phrog_1 | integrase | integration and excision |
| UHGV-0352720_66 | UniRef90 | UniRef90_A0A3B9DV66 | Recombinase XerC | NA |
| UHGV-0352720_66 | eggNOG-mapper | 1273103.NM10_01678 | Phage integrase family | NA |
| UHGV-0352720_66 | Pfam | PF00589 | Phage integrase family | Phage_integrase |
| UHGV-0352720_66 | COG | COG4974 | Site-specific recombinase XerD | NA |
| UHGV-0352720_66 | Structural annotation | PF00589, MF_01808, NF007246, COG4974 | NA | NA |
| UHGV-0352720_67 | PHROG | phrog_32639 | NA | unknown function |
| UHGV-0352720_67 | Structural annotation | PF21611 | NA | NA |
| UHGV-0352720_70 | PHROG | phrog_918 | NA | unknown function |
| UHGV-0352720_70 | UniRef90 | UniRef90_UPI001D020797 | NA | NA |
| UHGV-0352720_70 | eggNOG-mapper | 272626.lin0103 | NA | NA |
| UHGV-0352720_70 | Pfam | PF19791 | NA | DUF6275 |
| UHGV-0352720_70 | Structural annotation | PF19791 | NA | NA |
| UHGV-0352720_71 | eggNOG-mapper | 1378168.N510_03079 | NA | NA |
| UHGV-0352720_72 | Structural annotation | PF04545, MF_00674, NF001073, COG1342 | NA | NA |
| UHGV-0352720_75 | PHROG | phrog_16490 | NA | unknown function |
| UHGV-0352720_75 | UniRef90 | UniRef90_A0A7M1RZU0 | Spike protein/glycoprotein | NA |
| UHGV-0352720_75 | eggNOG-mapper | 397290.C810_01328 | NA | NA |
| UHGV-0352720_76 | eggNOG-mapper | 1401067.HMPREF0872_03755 | NA | NA |
| UHGV-0352720_76 | Structural annotation | PF11134, MF_03008, NF010237, TIGR04362, COG4257 | NA | NA |
| UHGV-0352720_77 | Structural annotation | PF00765, MF_02210, NF007644, COG2153 | NA | NA |
| UHGV-0352720_78 | UniRef90 | UniRef90_A0A1G6NNF8 | Intein N-terminal splicing region | NA |
| UHGV-0352720_78 | eggNOG-mapper | 1232428.CAVO010000067_gene416 | NA | NA |
| UHGV-0352720_78 | Structural annotation | PF01079, NF038136 | NA | NA |
| UHGV-0352720_80 | KOfam | K14440 | SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-] | NA |
| UHGV-0352720_80 | PHROG | phrog_10089 | DarB-like antirestriction | moron, auxiliary metabolic gene and host takeover |
| UHGV-0352720_80 | UniRef90 | UniRef90_UPI00141A22AB | PLxRFG domain-containing protein | NA |
| UHGV-0352720_80 | eggNOG-mapper | 1280698.AUJS01000017_gene1792 | SNF2 family N-terminal domain | NA |
| UHGV-0352720_80 | PADLOC | DrmD_00004 | DrmD | DISARM |
| UHGV-0352720_80 | Pfam | PF18013 | Phage tail lysozyme | Phage_lysozyme2 |
| UHGV-0352720_80 | Pfam | PF18763 | ddrB-like ParB superfamily domain | ddrB-ParB |
| UHGV-0352720_80 | COG | COG0553 | Superfamily II DNA or RNA helicase, SNF2 family | NA |
| UHGV-0352720_82 | KOfam | K06400 | spoIVCA; site-specific DNA recombinase | NA |
| UHGV-0352720_82 | PHROG | phrog_95 | integrase | integration and excision |
| UHGV-0352720_82 | UniRef90 | UniRef90_UPI0016482ABA | recombinase family protein | NA |
| UHGV-0352720_82 | eggNOG-mapper | 706434.HMPREF9429_00560 | overlaps another CDS with the same product name | NA |
| UHGV-0352720_82 | Pfam | PF00239 | Resolvase, N terminal domain | Resolvase |
| UHGV-0352720_82 | Pfam | PF07508 | Recombinase | Recombinase |
| UHGV-0352720_82 | Pfam | PF13408 | Recombinase zinc beta ribbon domain | Zn_ribbon_recom |
| UHGV-0352720_82 | COG | COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | NA |
| UHGV-0352720_82 | Structural annotation | PF00239, PF07508, NF041201, COG1961 | NA | NA |