UHGV-0366123

Genome information

vOTU vOTU-020676

Genome length 30,679 bps

CDS count 52

Completeness 88.55% (medium-quality)

geNomad score 0.9793

Prediction confidence Confident

Genome information
Genome ID	UHGV-0366123
vOTU ID	vOTU-020676
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k141_114835_round13~6781535
BioSample	SAMN11418675
Country	India
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88.55% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9793
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.87
Jumbo phage	No

Genome content
Genome length	30,679 bps
GC content	37.72%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	52
CDS density	90.90%
Average CDS length	539.94 bps
tRNA count	5
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0366123_3	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0366123_3	UniRef90	UniRef90_R7NQ63	HTH cro/C1-type domain-containing protein	NA
UHGV-0366123_3	eggNOG-mapper	714961.BFZC1_17989	Helix-turn-helix XRE-family like proteins	NA
UHGV-0366123_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0366123_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0366123_3	Structural annotation	PF13560, MF_00535, NF007257, COG1396	NA	NA
UHGV-0366123_10	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-0366123_10	PHROG	phrog_1499	NA	unknown function
UHGV-0366123_10	UniRef90	UniRef90_UPI00164CEF4D	AAA family ATPase	NA
UHGV-0366123_10	eggNOG-mapper	1120998.AUFC01000030_gene2215	DNA recombination	NA
UHGV-0366123_10	Pfam	PF13476	AAA domain	AAA_23
UHGV-0366123_10	COG	COG0497	DNA repair ATPase RecN	NA
UHGV-0366123_10	Structural annotation	PF11398, MF_00365, NF008121, COG0497	NA	NA
UHGV-0366123_11	PHROG	phrog_21613	NA	unknown function
UHGV-0366123_11	eggNOG-mapper	1120998.AUFC01000030_gene2214	NA	NA
UHGV-0366123_12	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0366123_12	UniRef90	UniRef90_A0A3D0X749	NA	NA
UHGV-0366123_12	eggNOG-mapper	887325.HMPREF0381_0097	NA	NA
UHGV-0366123_12	Pfam	PF12684	NA	DUF3799
UHGV-0366123_12	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0366123_12	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-0366123_13	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0366123_13	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0366123_13	UniRef90	UniRef90_R6HDB5	Single-stranded DNA-binding protein	NA
UHGV-0366123_13	eggNOG-mapper	428125.CLOLEP_00518	Single-stranded DNA-binding protein	NA
UHGV-0366123_13	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0366123_13	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0366123_13	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0366123_13	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0366123_13	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0366123_14	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-0366123_14	UniRef90	UniRef90_A0A1C6FNL5	ERCC4 domain-containing protein	NA
UHGV-0366123_14	eggNOG-mapper	357809.Cphy_2986	NA	NA
UHGV-0366123_14	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-0366123_14	Structural annotation	PF03834, NF040956, COG1948	NA	NA
UHGV-0366123_15	PHROG	phrog_277	replication initiation O-like	DNA, RNA and nucleotide metabolism
UHGV-0366123_15	UniRef90	UniRef90_K2G5E4	Phage_rep_O domain-containing protein	NA
UHGV-0366123_15	eggNOG-mapper	1230341.MJ3_13494	Bacteriophage replication protein O	NA
UHGV-0366123_15	Pfam	PF04492	Bacteriophage replication protein O	Phage_rep_O
UHGV-0366123_15	NCBIFam	TIGR01610.1	phage replication protein O, N-terminal domain	NA
UHGV-0366123_15	Structural annotation	PF01978, MF_01819, TIGR01610, COG3355	NA	NA
UHGV-0366123_23	eggNOG-mapper	1123263.AUKY01000072_gene2097	NA	NA
UHGV-0366123_25	Structural annotation	PF04012	NA	NA
UHGV-0366123_29	PHROG	phrog_25385	NA	unknown function
UHGV-0366123_29	eggNOG-mapper	748224.HMPREF9436_03077	NA	NA
UHGV-0366123_31	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0366123_31	UniRef90	UniRef90_UPI001AE521D9	RNA polymerase subunit sigma-24	NA
UHGV-0366123_31	eggNOG-mapper	887325.HMPREF0381_0089	sigma factor activity	NA
UHGV-0366123_31	Pfam	PF07374	NA	DUF1492
UHGV-0366123_31	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0366123_31	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0366123_32	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0366123_32	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0366123_32	UniRef90	UniRef90_R6QUI1	Phage terminase small subunit	NA
UHGV-0366123_32	eggNOG-mapper	1160721.RBI_II00483	DNA packaging	NA
UHGV-0366123_32	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0366123_32	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0366123_32	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0366123_33	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0366123_33	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0366123_33	UniRef90	UniRef90_A0A374N1S8	Terminase	NA
UHGV-0366123_33	eggNOG-mapper	1282664.H354_06621	Phage terminase, large subunit, PBSX family	NA
UHGV-0366123_33	COG	COG1783	Phage terminase large subunit	NA
UHGV-0366123_33	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0366123_34	PHROG	phrog_533	portal protein	head and packaging
UHGV-0366123_34	UniRef90	UniRef90_A0A348ZC72	Capsid protein	NA
UHGV-0366123_34	eggNOG-mapper	33035.JPJF01000093_gene2257	NA	NA
UHGV-0366123_34	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0366123_35	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0366123_35	UniRef90	UniRef90_UPI001B3C8EB1	minor capsid protein	NA
UHGV-0366123_35	eggNOG-mapper	33035.JPJF01000093_gene2255	NA	NA
UHGV-0366123_35	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0366123_35	COG	COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	NA
UHGV-0366123_35	Structural annotation	PF06152	NA	NA
UHGV-0366123_36	UniRef90	UniRef90_R5P5B5	Conserved domain protein	NA
UHGV-0366123_38	Structural annotation	PF01281	NA	NA
UHGV-0366123_39	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0366123_39	eggNOG-mapper	33035.JPJF01000093_gene2253	NA	NA
UHGV-0366123_40	PHROG	phrog_422	major head protein	head and packaging
UHGV-0366123_40	UniRef90	UniRef90_UPI001C03381A	phage capsid protein	NA
UHGV-0366123_40	eggNOG-mapper	445972.ANACOL_01845	NA	NA
UHGV-0366123_40	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0366123_41	eggNOG-mapper	483218.BACPEC_01153	NA	NA
UHGV-0366123_42	PHROG	phrog_8710	NA	unknown function
UHGV-0366123_42	eggNOG-mapper	1304866.K413DRAFT_0782	NA	NA
UHGV-0366123_42	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0366123_43	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0366123_43	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-0366123_44	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0366123_44	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-0366123_44	eggNOG-mapper	1123263.AUKY01000051_gene1075	NA	NA
UHGV-0366123_44	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0366123_45	PHROG	phrog_820	major tail protein	tail
UHGV-0366123_45	eggNOG-mapper	1282664.H354_06691	NA	NA
UHGV-0366123_45	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0366123_46	PHROG	phrog_8300	NA	unknown function
UHGV-0366123_46	eggNOG-mapper	1282664.H354_06701	NA	NA
UHGV-0366123_46	Structural annotation	PF06854	NA	NA
UHGV-0366123_47	PHROG	phrog_8355	NA	unknown function
UHGV-0366123_47	UniRef90	UniRef90_UPI001D0684E3	bacteriophage Gp15 family protein	NA
UHGV-0366123_47	eggNOG-mapper	1282664.H354_06706	NA	NA
UHGV-0366123_49	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0366123_49	UniRef90	UniRef90_A0A2N0ULX3	Phage-related protein	NA
UHGV-0366123_49	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-0366123_49	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0366123_49	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0366123_50	PHROG	phrog_1194	NA	unknown function
UHGV-0366123_50	UniRef90	UniRef90_A0A8D9PDT1	YolD-like protein	NA
UHGV-0366123_50	eggNOG-mapper	1235790.C805_00088	NA	NA
UHGV-0366123_50	Pfam	PF20458	NA	DUF6711
UHGV-0366123_50	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0366123_51	PHROG	phrog_18190	NA	unknown function
UHGV-0366123_51	Structural annotation	PF14594, NF033848, COG3500	NA	NA