UHGV-0372284

Genome information

vOTU vOTU-020426

Genome length 24,768 bps

CDS count 34

Completeness 66.89% (medium-quality)

geNomad score 0.9791

Prediction confidence Confident

Genome information
Genome ID	UHGV-0372284
vOTU ID	vOTU-020426
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k141_6605_round8-12~3255456
BioSample	SAMN03281020
Country	Singapore
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	66.89% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9791
Virus hallmark genes (geNomad)	16
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.15
Jumbo phage	No

Genome content
Genome length	24,768 bps
GC content	50.85%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	34
CDS density	89.68%
Average CDS length	659.65 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0372284_1	PHROG	phrog_198	holin	lysis
UHGV-0372284_1	UniRef90	UniRef90_A0A0F6TUZ0	Membrane protein	NA
UHGV-0372284_1	eggNOG-mapper	1399774.JDWH01000016_gene3442	Putative phage holin	NA
UHGV-0372284_1	Pfam	PF16931	Putative phage holin	Phage_holin_8
UHGV-0372284_1	Structural annotation	PF16931	NA	NA
UHGV-0372284_2	PHROG	phrog_217	holin	lysis
UHGV-0372284_2	UniRef90	UniRef90_A0A168RD66	Membrane protein	NA
UHGV-0372284_2	eggNOG-mapper	573.JG24_10930	Putative 3TM holin, Phage_holin_3	NA
UHGV-0372284_2	Pfam	PF05449	Putative 3TM holin, Phage_holin_3	Phage_holin_3_7
UHGV-0372284_3	KOfam	K03791	K03791; putative chitinase	NA
UHGV-0372284_3	PHROG	phrog_181	endolysin	lysis
UHGV-0372284_3	UniRef90	UniRef90_A0A163VDW5	Lytic enzyme	NA
UHGV-0372284_3	eggNOG-mapper	1399774.JDWH01000016_gene3440	Chitinase class I	NA
UHGV-0372284_3	Pfam	PF00182	Chitinase class I	Glyco_hydro_19
UHGV-0372284_3	COG	COG3179	Chitinase, GH19 family	NA
UHGV-0372284_3	Structural annotation	PF00182, TIGR02282, COG3179	NA	NA
UHGV-0372284_4	PHROG	phrog_1026	Rz-like spanin	lysis
UHGV-0372284_4	eggNOG-mapper	571.MC52_01455	NA	NA
UHGV-0372284_5	PHROG	phrog_19753	NA	unknown function
UHGV-0372284_6	PHROG	phrog_17957	NA	unknown function
UHGV-0372284_7	PHROG	phrog_31461	NA	unknown function
UHGV-0372284_8	PHROG	phrog_571	NA	unknown function
UHGV-0372284_8	UniRef90	UniRef90_UPI000D746194	NA	NA
UHGV-0372284_8	eggNOG-mapper	1028307.EAE_22330	NA	NA
UHGV-0372284_8	Pfam	PF10834	NA	DUF2560
UHGV-0372284_8	Structural annotation	PF10834	NA	NA
UHGV-0372284_9	PHROG	phrog_28897	NA	unknown function
UHGV-0372284_9	UniRef90	UniRef90_A0A7H4P5W2	TFIIB-type domain-containing protein	NA
UHGV-0372284_9	eggNOG-mapper	10754.VEAG_BPP22	NA	NA
UHGV-0372284_10	PHROG	phrog_2323	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0372284_10	UniRef90	UniRef90_A0A2X4YRT2	HNH endonuclease	NA
UHGV-0372284_10	eggNOG-mapper	573.JG24_10965	HNH nucleases	NA
UHGV-0372284_10	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0372284_11	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0372284_11	UniRef90	UniRef90_A0A377ZY98	Phage terminase small subunit	NA
UHGV-0372284_11	eggNOG-mapper	35703.DQ02_24235	phage terminase small subunit	NA
UHGV-0372284_11	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0372284_11	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0372284_11	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0372284_11	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0372284_12	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0372284_12	UniRef90	UniRef90_A0A377ZYG0	Phage terminase large subunit	NA
UHGV-0372284_12	eggNOG-mapper	573.JG24_10975	terminase	NA
UHGV-0372284_12	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0372284_12	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0372284_12	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0372284_12	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0372284_13	PHROG	phrog_12	portal protein	head and packaging
UHGV-0372284_13	UniRef90	UniRef90_A0A2X4YRU1	Phage portal protein	NA
UHGV-0372284_13	eggNOG-mapper	1397284.AYMN01000081_gene2458	Phage portal protein	NA
UHGV-0372284_13	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0372284_13	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0372284_13	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0372284_13	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0372284_14	KOfam	K06904	NA	NA
UHGV-0372284_14	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0372284_14	UniRef90	UniRef90_UPI0004E19E94	HK97 family phage prohead protease	NA
UHGV-0372284_14	eggNOG-mapper	1115515.EV102420_11_00190	Caudovirus prohead serine protease	NA
UHGV-0372284_14	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0372284_14	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0372284_14	COG	COG3740	Phage head maturation protease	NA
UHGV-0372284_14	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0372284_15	PHROG	phrog_10	major head protein	head and packaging
UHGV-0372284_15	UniRef90	UniRef90_A0A286S1R4	Major capsid protein	NA
UHGV-0372284_15	eggNOG-mapper	1115515.EV102420_11_00180	capsid protein	NA
UHGV-0372284_15	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0372284_15	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0372284_15	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0372284_15	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0372284_16	PHROG	phrog_18204	NA	unknown function
UHGV-0372284_17	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0372284_17	UniRef90	UniRef90_A0A377ZGK2	Phage gp6-like head-tail connector protein	NA
UHGV-0372284_17	eggNOG-mapper	1115515.EV102420_11_00160	Phage gp6-like head-tail connector protein	NA
UHGV-0372284_17	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0372284_17	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0372284_18	PHROG	phrog_2612	NA	unknown function
UHGV-0372284_18	UniRef90	UniRef90_A0A8F4G2J7	HU family DNA-binding protein	NA
UHGV-0372284_18	eggNOG-mapper	1147143.K7P6F3_9CAUD	NA	NA
UHGV-0372284_19	PHROG	phrog_25	head closure Hc1	connector
UHGV-0372284_19	UniRef90	UniRef90_A0A7I0E463	Head-tail adaptor protein	NA
UHGV-0372284_19	eggNOG-mapper	1147150.K7PH08_9CAUD	Phage head-tail joining protein	NA
UHGV-0372284_19	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0372284_19	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0372284_19	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0372284_20	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0372284_20	UniRef90	UniRef90_UPI001F326D52	HK97 gp10 family phage protein	NA
UHGV-0372284_20	eggNOG-mapper	1147150.K7PM60_9CAUD	exonuclease activity	NA
UHGV-0372284_20	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0372284_20	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0372284_20	Structural annotation	TIGR01725	NA	NA
UHGV-0372284_21	PHROG	phrog_78	tail terminator	connector
UHGV-0372284_21	UniRef90	UniRef90_A0A1X9TNY6	NA	NA
UHGV-0372284_21	eggNOG-mapper	10742.Q9MCV0_BPHK0	NA	NA
UHGV-0372284_21	Pfam	PF11367	NA	DUF3168
UHGV-0372284_21	Structural annotation	PF11367	NA	NA
UHGV-0372284_22	PHROG	phrog_158	major tail protein	tail
UHGV-0372284_22	UniRef90	UniRef90_A0A8F4G6C2	Phage tail protein	NA
UHGV-0372284_22	eggNOG-mapper	932213.SPM24T3_24191	Phage tail tube, TTP, lambda-like	NA
UHGV-0372284_22	Pfam	PF16460	Phage tail tube, TTP, lambda-like	Phage_TTP_11
UHGV-0372284_22	Structural annotation	PF16460, TIGR02241, COG5437	NA	NA
UHGV-0372284_23	PHROG	phrog_1749	tail assembly chaperone	tail
UHGV-0372284_23	UniRef90	UniRef90_UPI0005165ADE	phage tail assembly chaperone family protein, TAC	NA
UHGV-0372284_23	eggNOG-mapper	10742.Q9MCU8_BPHK0	Pfam:Phage_TAC_13	NA
UHGV-0372284_23	Pfam	PF16459	Phage tail assembly chaperone, TAC	Phage_TAC_13
UHGV-0372284_23	Structural annotation	PF16459	NA	NA
UHGV-0372284_24	PHROG	phrog_337	tail protein	tail
UHGV-0372284_24	UniRef90	UniRef90_A0A8A7GDE6	Phage tail protein	NA
UHGV-0372284_24	eggNOG-mapper	932213.SPM24T3_24201	NA	NA
UHGV-0372284_25	PHROG	phrog_8032	NA	unknown function
UHGV-0372284_25	UniRef90	UniRef90_A0A1I6D571	LPXTG-motif cell wall anchor domain-containing protein	NA
UHGV-0372284_25	eggNOG-mapper	520999.PROVALCAL_03987	NA	NA
UHGV-0372284_26	PHROG	phrog_2854	tail length tape measure protein	tail
UHGV-0372284_26	UniRef90	UniRef90_UPI000E2C2E4B	phage tail tape measure protein	NA
UHGV-0372284_26	eggNOG-mapper	640513.Entas_3068	lytic transglycosylase activity	NA
UHGV-0372284_26	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-0372284_26	NCBIFam	TIGR01541.1	phage tail tape measure protein	NA
UHGV-0372284_26	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0372284_27	PHROG	phrog_384	virion structural protein	head and packaging
UHGV-0372284_27	UniRef90	UniRef90_A0A377Z7R0	Alkanesulfonate ABC transporter permease	NA
UHGV-0372284_27	eggNOG-mapper	1028307.EAE_21020	NA	NA
UHGV-0372284_27	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-0372284_28	PHROG	phrog_396	minor tail protein	tail
UHGV-0372284_28	UniRef90	UniRef90_A0A377ZDS5	ArsR family transcriptional regulator	NA
UHGV-0372284_28	eggNOG-mapper	371042.NG99_23805	NA	NA
UHGV-0372284_28	Pfam	PF08875	NA	DUF1833
UHGV-0372284_28	Structural annotation	PF08875, TIGR01600, COG4672	NA	NA
UHGV-0372284_29	PHROG	phrog_329	minor tail protein	tail
UHGV-0372284_29	UniRef90	UniRef90_A0A330XBC2	Nitrite transporter	NA
UHGV-0372284_29	eggNOG-mapper	1225184.ALXE01000018_gene3828	NA	NA
UHGV-0372284_29	Structural annotation	TIGR02219	NA	NA
UHGV-0372284_30	PHROG	phrog_469	tail protein	tail
UHGV-0372284_30	UniRef90	UniRef90_A0A443WQ78	Kinase	NA
UHGV-0372284_30	eggNOG-mapper	571.MC52_01330	cellulase activity	NA
UHGV-0372284_30	NCBIFam	NF040662.1	host specificity factor TipJ family phage tail protein	NA
UHGV-0372284_30	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0372284_30	Structural annotation	PF13550, NF040662, TIGR01683, COG2104	NA	NA
UHGV-0372284_31	PHROG	phrog_19652	NA	unknown function
UHGV-0372284_31	UniRef90	UniRef90_A0A486NB80	Putative prophage endo-N-neuraminidase	NA
UHGV-0372284_31	eggNOG-mapper	215158.FIBER_BPE15	outer membrane	NA
UHGV-0372284_32	PHROG	phrog_19357	NA	unknown function
UHGV-0372284_32	Structural annotation	PF02973	NA	NA
UHGV-0372284_33	PHROG	phrog_3893	NA	unknown function
UHGV-0372284_33	eggNOG-mapper	571.MC52_15285	NA	NA
UHGV-0372284_34	PHROG	phrog_3469	UmuD-like protein	DNA, RNA and nucleotide metabolism
UHGV-0372284_34	UniRef90	UniRef90_A0A377YDI9	UmnD	NA
UHGV-0372284_34	eggNOG-mapper	571.MC52_18370	NA	NA
UHGV-0372284_34	Structural annotation	PF16452, MF_00015, NF007621, COG2932	NA	NA