UHGV-0444969

Genome information

Genome length 42,628 bps

CDS count 57

Completeness 95.54% (high-quality)

geNomad score 0.9749

Prediction confidence Confident

Genome information
Genome ID	UHGV-0444969
vOTU ID	vOTU-073203
vOTU representative	Yes
Source dataset	COPSAC
Original genome ID	OTU_1664
BioSample	NA
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.54% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9749
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	67.71
Jumbo phage	No

Genome content
Genome length	42,628 bps
GC content	28.72%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	57
CDS density	87.76%
Average CDS length	658.90 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0444969_1	PHROG	phrog_7809	tail fiber protein	tail
UHGV-0444969_1	eggNOG-mapper	1582149.A0A0A8WJ53_9CAUD	NA	NA
UHGV-0444969_2	PHROG	phrog_17134	NA	unknown function
UHGV-0444969_2	UniRef90	UniRef90_UPI001D110572	InlB B-repeat-containing protein	NA
UHGV-0444969_2	eggNOG-mapper	1582149.A0A0A8WEI2_9CAUD	signal transducer activity	NA
UHGV-0444969_3	PHROG	phrog_13289	tail protein	tail
UHGV-0444969_3	UniRef90	UniRef90_A0A8E2PCM6	Prophage_tail domain-containing protein	NA
UHGV-0444969_3	eggNOG-mapper	1582149.A0A0A8WIC9_9CAUD	peptidoglycan catabolic process	NA
UHGV-0444969_3	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0444969_3	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0444969_4	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0444969_4	UniRef90	UniRef90_A0A0A8WHP7	Putative Tail component protein	NA
UHGV-0444969_4	eggNOG-mapper	1582149.A0A0A8WHP7_9CAUD	Phage tail protein	NA
UHGV-0444969_4	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0444969_4	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0444969_5	PHROG	phrog_738	NA	unknown function
UHGV-0444969_5	UniRef90	UniRef90_T3D7L9	Putative membrane protein	NA
UHGV-0444969_6	KOfam	K20254	PLIN4; perilipin-4	NA
UHGV-0444969_6	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0444969_6	UniRef90	UniRef90_A0A1R7A5T6	Phage tail tape measure protein	NA
UHGV-0444969_6	eggNOG-mapper	1582149.A0A0A8WJ51_9CAUD	peptidoglycan catabolic process	NA
UHGV-0444969_6	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0444969_6	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0444969_7	PHROG	phrog_16443	NA	unknown function
UHGV-0444969_7	eggNOG-mapper	935948.KE386495_gene1339	NA	NA
UHGV-0444969_7	AcrCatalog	cluster_1135	NA	NA
UHGV-0444969_8	PHROG	phrog_6541	NA	unknown function
UHGV-0444969_9	PHROG	phrog_6280	NA	unknown function
UHGV-0444969_9	UniRef90	UniRef90_UPI001C800AF1	esterase	NA
UHGV-0444969_9	eggNOG-mapper	1443125.Z962_12410	NA	NA
UHGV-0444969_10	PHROG	phrog_6686	tail tube protein	tail
UHGV-0444969_10	UniRef90	UniRef90_UPI001CF4E607	Ig-like domain-containing protein	NA
UHGV-0444969_10	eggNOG-mapper	871584.D9ZNE2_9CAUD	NA	NA
UHGV-0444969_11	PHROG	phrog_7585	NA	unknown function
UHGV-0444969_11	eggNOG-mapper	748727.CLJU_c31260	NA	NA
UHGV-0444969_11	Structural annotation	PF05657, COG5003	NA	NA
UHGV-0444969_12	UniRef90	UniRef90_A0A2H4J736	Putative tail component protein	NA
UHGV-0444969_12	eggNOG-mapper	536232.CLM_2519	Phage virion morphogenesis	NA
UHGV-0444969_12	COG	COG5005	NA	NA
UHGV-0444969_12	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0444969_13	PHROG	phrog_8435	NA	unknown function
UHGV-0444969_13	eggNOG-mapper	1443122.Z958_05855	NA	NA
UHGV-0444969_13	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0444969_14	PHROG	phrog_4020	NA	unknown function
UHGV-0444969_14	eggNOG-mapper	445335.CBN_3083	NA	NA
UHGV-0444969_15	PHROG	phrog_247	major head protein	head and packaging
UHGV-0444969_15	UniRef90	UniRef90_A0A0A8WJ45	Phage coat protein	NA
UHGV-0444969_15	eggNOG-mapper	1582149.A0A0A8WJ45_9CAUD	viral capsid	NA
UHGV-0444969_15	Pfam	PF20036	Major capsid protein 13-like	Gp13-like
UHGV-0444969_15	Structural annotation	PF20036, MF_04113, TIGR04387, COG4834	NA	NA
UHGV-0444969_16	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0444969_16	UniRef90	UniRef90_UPI0018AB6737	phage scaffolding protein	NA
UHGV-0444969_16	eggNOG-mapper	1582149.A0A0A8WEG1_9CAUD	Phage minor structural protein GP20	NA
UHGV-0444969_16	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0444969_16	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0444969_17	PHROG	phrog_8857	NA	unknown function
UHGV-0444969_18	PHROG	phrog_8857	NA	unknown function
UHGV-0444969_19	PHROG	phrog_25063	NA	unknown function
UHGV-0444969_19	UniRef90	UniRef90_A0A0A8WDY4	ADPrib_exo_Tox domain-containing protein	NA
UHGV-0444969_19	eggNOG-mapper	1582149.A0A0A8WEF5_9CAUD	Phage Mu protein F like protein	NA
UHGV-0444969_19	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0444969_20	PHROG	phrog_8857	NA	unknown function
UHGV-0444969_21	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0444969_21	UniRef90	UniRef90_A0A1R5GR66	ADPrib_exo_Tox domain-containing protein	NA
UHGV-0444969_21	eggNOG-mapper	1582149.A0A0A8WEF5_9CAUD	Phage Mu protein F like protein	NA
UHGV-0444969_21	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0444969_21	Structural annotation	PF03496, PF04233, MF_04141, NF041404, TIGR01641, COG2369	NA	NA
UHGV-0444969_22	PHROG	phrog_64	portal protein	head and packaging
UHGV-0444969_22	UniRef90	UniRef90_A0A371IQX1	Phage portal protein	NA
UHGV-0444969_22	eggNOG-mapper	1121342.AUCO01000012_gene1700	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0444969_22	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0444969_22	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0444969_23	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0444969_23	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0444969_23	UniRef90	UniRef90_A0A0A8WHN3	Terminase, large subunit	NA
UHGV-0444969_23	eggNOG-mapper	1582149.A0A0A8WHN3_9CAUD	Phage terminase large subunit	NA
UHGV-0444969_23	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0444969_23	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0444969_23	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0444969_23	HAMAP	MF_04145	Terminase, large subunit	NA
UHGV-0444969_23	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0444969_24	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0444969_24	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0444969_24	UniRef90	UniRef90_A0A1R5GR55	Terminase small subunit	NA
UHGV-0444969_24	eggNOG-mapper	1582149.A0A0A8WDX8_9CAUD	Terminase small subunit	NA
UHGV-0444969_24	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0444969_24	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0444969_25	PHROG	phrog_2655	excisionase	integration and excision
UHGV-0444969_25	UniRef90	UniRef90_T3D6V8	HTH_59 domain-containing protein	NA
UHGV-0444969_25	eggNOG-mapper	1151292.QEW_4392	NA	NA
UHGV-0444969_25	Pfam	PF20038	Helix-turn-helix domain	HTH_59
UHGV-0444969_25	Structural annotation	PF20038, TIGR01764	NA	NA
UHGV-0444969_26	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0444969_26	UniRef90	UniRef90_Q0SPJ6	Probable sigma factor	NA
UHGV-0444969_26	eggNOG-mapper	1408823.AXUS01000025_gene2668	sigma factor activity	NA
UHGV-0444969_26	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0444969_26	Structural annotation	PF08281, MF_00674, TIGR01636, COG1595	NA	NA
UHGV-0444969_27	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0444969_27	UniRef90	UniRef90_UPI00189A5C86	NA	NA
UHGV-0444969_27	eggNOG-mapper	1582149.A0A0A8WEP5_9CAUD	NA	NA
UHGV-0444969_27	Pfam	PF06356	NA	DUF1064
UHGV-0444969_27	Structural annotation	PF06356, MF_04160, NF033179, COG2887	NA	NA
UHGV-0444969_28	PHROG	phrog_4531	NA	unknown function
UHGV-0444969_29	PHROG	phrog_2961	NA	unknown function
UHGV-0444969_29	eggNOG-mapper	1522092.A0A090DCW0_9CAUD	NA	NA
UHGV-0444969_30	PHROG	phrog_1310	NA	unknown function
UHGV-0444969_30	UniRef90	UniRef90_T3D625	NUMOD1 domain protein	NA
UHGV-0444969_30	eggNOG-mapper	1522092.A0A090D844_9CAUD	NA	NA
UHGV-0444969_31	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0444969_31	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0444969_31	UniRef90	UniRef90_A0A1M2Y778	Single-stranded DNA-binding protein	NA
UHGV-0444969_31	eggNOG-mapper	1582149.A0A0A8WIG9_9CAUD	Single-strand binding protein family	NA
UHGV-0444969_31	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0444969_31	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0444969_31	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0444969_31	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0444969_32	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0444969_32	PHROG	phrog_13390	NA	unknown function
UHGV-0444969_32	UniRef90	UniRef90_A0A6B9J1K6	DnaB_2 domain-containing protein	NA
UHGV-0444969_32	eggNOG-mapper	1582149.A0A0A8WHS7_9CAUD	calcium ion binding	NA
UHGV-0444969_32	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0444969_32	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0444969_32	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0444969_33	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0444969_33	UniRef90	UniRef90_UPI001D0F9219	ERF family protein	NA
UHGV-0444969_33	eggNOG-mapper	1151292.QEW_4381	ERF superfamily	NA
UHGV-0444969_33	Pfam	PF04404	ERF superfamily	ERF
UHGV-0444969_33	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0444969_34	PHROG	phrog_4500	NA	unknown function
UHGV-0444969_35	PHROG	phrog_2219	NA	unknown function
UHGV-0444969_35	UniRef90	UniRef90_A0A0A8WFK1	Putative phage protein	NA
UHGV-0444969_36	PHROG	phrog_2047	NA	unknown function
UHGV-0444969_37	PHROG	phrog_1877	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0444969_37	UniRef90	UniRef90_A0A6B9J201	HTH_17 domain-containing protein	NA
UHGV-0444969_37	eggNOG-mapper	1582156.A0A0A8WFG8_9CAUD	Helix-turn-helix domain	NA
UHGV-0444969_38	PHROG	phrog_22513	NA	unknown function
UHGV-0444969_39	PHROG	phrog_27427	NA	unknown function
UHGV-0444969_40	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0444969_40	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0444969_40	UniRef90	UniRef90_A0A6B9J0N2	Antirepressor protein	NA
UHGV-0444969_40	eggNOG-mapper	1582149.A0A0A8WIE3_9CAUD	DNA binding	NA
UHGV-0444969_40	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0444969_40	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0444969_40	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0444969_40	Structural annotation	PF09669, PF03374, TIGR02681, COG3646	NA	NA
UHGV-0444969_41	PHROG	phrog_582	Arc-like repressor	transcription regulation
UHGV-0444969_41	UniRef90	UniRef90_T3D614	Ribbon-helix-helix, copG family protein	NA
UHGV-0444969_41	Pfam	PF05534	HicB family	HicB
UHGV-0444969_42	UniRef90	UniRef90_A3QSE1	Arc domain-containing protein	NA
UHGV-0444969_42	eggNOG-mapper	1151292.QEW_4373	Arc-like DNA binding domain	NA
UHGV-0444969_42	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-0444969_42	Structural annotation	PF03869, NF008671, COG4877	NA	NA
UHGV-0444969_43	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0444969_43	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0444969_43	UniRef90	UniRef90_A0A0A8WIE3	Bro-N domain-containing protein	NA
UHGV-0444969_43	eggNOG-mapper	1582149.A0A0A8WIE3_9CAUD	DNA binding	NA
UHGV-0444969_43	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0444969_43	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0444969_44	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0444969_44	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0444969_44	UniRef90	UniRef90_A0A0A8WHR3	Transcriptional regulator PBSX family (Modular protein)	NA
UHGV-0444969_44	eggNOG-mapper	1450694.BTS2_0424	transcriptional	NA
UHGV-0444969_44	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0444969_44	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0444969_44	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0444969_45	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0444969_45	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0444969_45	UniRef90	UniRef90_A0A0A8WE28	DNA-binding helix-turn-helix protein	NA
UHGV-0444969_45	eggNOG-mapper	1151292.QEW_1742	Helix-turn-helix domain	NA
UHGV-0444969_45	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0444969_45	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0444969_45	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-0444969_46	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0444969_46	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0444969_46	UniRef90	UniRef90_A0A0A8WJ60	DNA-binding helix-turn-helix protein	NA
UHGV-0444969_46	eggNOG-mapper	1582149.A0A0A8WJ60_9CAUD	protein disulfide oxidoreductase activity	NA
UHGV-0444969_46	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0444969_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0444969_46	NCBIFam	NF041951.1	RstR family transcriptional repressor	NA
UHGV-0444969_47	PHROG	phrog_87	metallo-protease	other
UHGV-0444969_47	UniRef90	UniRef90_A0A0N1HW48	Peptidase_M78 domain-containing protein	NA
UHGV-0444969_47	eggNOG-mapper	1151292.QEW_1741	IrrE N-terminal-like domain	NA
UHGV-0444969_47	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0444969_47	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0444969_47	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0444969_48	KOfam	K14059	int; integrase	NA
UHGV-0444969_48	PHROG	phrog_1	integrase	integration and excision
UHGV-0444969_48	UniRef90	UniRef90_A0A0A8WIE1	Integrase	NA
UHGV-0444969_48	eggNOG-mapper	1582149.A0A0A8WIE1_9CAUD	Phage integrase family	NA
UHGV-0444969_48	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0444969_48	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0444969_48	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0444969_48	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0444969_50	PHROG	phrog_2329	NA	unknown function
UHGV-0444969_50	UniRef90	UniRef90_A0A069AE74	Putative PemI	NA
UHGV-0444969_50	Structural annotation	MF_01193, NF007312, COG2336	NA	NA
UHGV-0444969_51	PHROG	phrog_2329	NA	unknown function
UHGV-0444969_51	UniRef90	UniRef90_A0A160W0V4	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-0444969_51	eggNOG-mapper	1151292.QEW_0754	NA	NA
UHGV-0444969_51	Structural annotation	MF_01193, NF007312, COG2336	NA	NA
UHGV-0444969_52	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0444969_52	PHROG	phrog_9482	NA	unknown function
UHGV-0444969_52	UniRef90	UniRef90_A0A6B9J229	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0444969_52	eggNOG-mapper	1151292.QEW_4517	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0444969_52	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0444969_52	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0444969_52	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0444969_53	PHROG	phrog_4884	holin	lysis
UHGV-0444969_53	UniRef90	UniRef90_T3DQK0	Putative holin	NA
UHGV-0444969_54	PHROG	phrog_2310	NA	unknown function
UHGV-0444969_54	eggNOG-mapper	1151292.QEW_0364	NA	NA
UHGV-0444969_55	PHROG	phrog_8852	NA	unknown function
UHGV-0444969_56	PHROG	phrog_6782	tail fiber protein	tail
UHGV-0444969_56	eggNOG-mapper	1151292.QEW_0675	NA	NA
UHGV-0444969_57	PHROG	phrog_7809	tail fiber protein	tail