| Genome information | |
|---|---|
| Genome ID | UHGV-0873186 |
| vOTU ID | vOTU-060243 |
| vOTU representative | No |
| Source dataset | HuVirDB |
| Original genome ID | ERS795748|NODE_11_length_12150_cov_6.009898 |
| BioSample | SAMEA3488599 |
| Country | Malawi |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 18.05% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9787 |
| Virus hallmark genes (geNomad) | 0 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 3.25 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 12,150 bps |
| GC content | 38.64% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 22 |
| CDS density | 94.48% |
| Average CDS length | 524.32 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |