| Genome information | |
|---|---|
| Genome ID | UHGV-1277109 |
| vOTU ID | vOTU-003089 |
| vOTU representative | No |
| Source dataset | GVD |
| Original genome ID | Han_2018_ERR1398179_NODE_1521_length_11716_cov_5.026756 |
| BioSample | SAMEA3951722 |
| Country | China |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 11.22% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9804 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | -0.36 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 11,716 bps |
| GC content | 57.54% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 12 |
| CDS density | 90.18% |
| Average CDS length | 885.75 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |