UHGV-1349191

Genome information

Genome length 21,957 bps

CDS count 24

Completeness 55.93% (medium-quality)

geNomad score 0.9747

Prediction confidence Confident

Genome information
Genome ID	UHGV-1349191
vOTU ID	vOTU-031281
vOTU representative	Yes
Source dataset	GVD
Original genome ID	Norman_102_NODE_15_length_21957_cov_15.742855
BioSample	NA
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.93% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9747
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.8
Jumbo phage	No

Genome content
Genome length	21,957 bps
GC content	36.05%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	24
CDS density	94.95%
Average CDS length	870.88 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1349191_3	UniRef90	UniRef90_A0A7W1XRD2	NA	NA
UHGV-1349191_3	eggNOG-mapper	471223.GWCH70_3247	NA	NA
UHGV-1349191_3	Pfam	PF11950	NA	DUF3467
UHGV-1349191_4	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1349191_4	PHROG	phrog_435	endolysin	lysis
UHGV-1349191_4	UniRef90	UniRef90_UPI0018A8EEC0	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1349191_4	eggNOG-mapper	1305836.AXVE01000003_gene2376	Ami_3	NA
UHGV-1349191_4	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1349191_4	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1349191_4	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1349191_4	Structural annotation	PF01520, PF19087, TIGR02883, COG0860, COG4991	NA	NA
UHGV-1349191_5	PHROG	phrog_1129	holin	lysis
UHGV-1349191_5	UniRef90	UniRef90_UPI0006C53BF4	phage holin family protein	NA
UHGV-1349191_5	eggNOG-mapper	702450.CUW_0551	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1349191_5	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1349191_5	Structural annotation	PF06946	NA	NA
UHGV-1349191_6	eggNOG-mapper	1280689.AUJC01000007_gene3301	NA	NA
UHGV-1349191_8	PHROG	phrog_16267	NA	unknown function
UHGV-1349191_8	UniRef90	UniRef90_A0A1H0N6V9	Phage minor structural protein, N-terminal region	NA
UHGV-1349191_8	eggNOG-mapper	702450.CUW_0547	NA	NA
UHGV-1349191_8	COG	COG4926	Phage-related protein	NA
UHGV-1349191_9	PHROG	phrog_1194	NA	unknown function
UHGV-1349191_9	UniRef90	UniRef90_A0A0R1VMM5	NA	NA
UHGV-1349191_9	eggNOG-mapper	702450.CUW_0546	NA	NA
UHGV-1349191_9	Pfam	PF20458	NA	DUF6711
UHGV-1349191_9	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1349191_10	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1349191_10	UniRef90	UniRef90_UPI000C0860A2	phage tail tape measure protein	NA
UHGV-1349191_10	eggNOG-mapper	702450.CUW_0543	phage tail tape measure protein	NA
UHGV-1349191_10	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-1349191_10	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1349191_11	PHROG	phrog_2066	NA	unknown function
UHGV-1349191_11	eggNOG-mapper	702450.CUW_0542	NA	NA
UHGV-1349191_12	UniRef90	UniRef90_U2Q3S7	NA	NA
UHGV-1349191_12	eggNOG-mapper	1294142.CINTURNW_1697	NA	NA
UHGV-1349191_13	PHROG	phrog_158	major tail protein	tail
UHGV-1349191_13	UniRef90	UniRef90_UPI00177C0BE7	phage tail protein	NA
UHGV-1349191_13	eggNOG-mapper	702450.CUW_0540	Phage tail tube protein, TTP	NA
UHGV-1349191_13	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-1349191_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1349191_15	UniRef90	UniRef90_A0A3S3LQJ1	HK97 gp10 family phage protein	NA
UHGV-1349191_15	eggNOG-mapper	1229751.R9QMA5_9CAUD	exonuclease activity	NA
UHGV-1349191_15	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-1349191_17	PHROG	phrog_132	head-tail adaptor	connector
UHGV-1349191_17	UniRef90	UniRef90_UPI0018A91D0C	phage head-tail connector protein	NA
UHGV-1349191_17	eggNOG-mapper	509191.AEDB02000075_gene2795	Phage gp6-like head-tail connector protein	NA
UHGV-1349191_17	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1349191_18	PHROG	phrog_267	major head protein	head and packaging
UHGV-1349191_18	eggNOG-mapper	1123405.AUMM01000039_gene151	P22 coat protein-protein 5 domain protein	NA
UHGV-1349191_19	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-1349191_19	UniRef90	UniRef90_A0A6G2CD74	NA	NA
UHGV-1349191_19	eggNOG-mapper	445974.CLORAM_02931	NA	NA
UHGV-1349191_19	Pfam	PF14265	NA	DUF4355
UHGV-1349191_19	Structural annotation	PF14265	NA	NA
UHGV-1349191_20	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1349191_20	UniRef90	UniRef90_UPI0018A8CD22	minor capsid protein	NA
UHGV-1349191_20	eggNOG-mapper	702450.CUW_0533	cell adhesion	NA
UHGV-1349191_20	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1349191_20	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1349191_20	COG	COG2369	NA	NA
UHGV-1349191_20	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1349191_21	PHROG	phrog_64	portal protein	head and packaging
UHGV-1349191_21	UniRef90	UniRef90_A0A6I3NCL2	Phage portal protein	NA
UHGV-1349191_21	eggNOG-mapper	702450.CUW_0532	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1349191_21	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1349191_21	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-1349191_21	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1349191_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1349191_22	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1349191_22	UniRef90	UniRef90_A0A6G2CD67	PBSX family phage terminase large subunit	NA
UHGV-1349191_22	eggNOG-mapper	702450.CUW_0531	Phage terminase, large subunit, PBSX family	NA
UHGV-1349191_22	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1349191_22	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1349191_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1349191_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-1349191_22	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1349191_23	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1349191_23	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1349191_23	UniRef90	UniRef90_A0A6G2CEL1	Terminase small subunit	NA
UHGV-1349191_23	eggNOG-mapper	702450.CUW_0530	Terminase Small Subunit	NA
UHGV-1349191_23	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1349191_23	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1349191_23	Structural annotation	PF03592, COG3728	NA	NA