| Genome information | |
|---|---|
| Genome ID | UHGV-1353446 |
| vOTU ID | vOTU-008633 |
| vOTU representative | No |
| Source dataset | GVD |
| Original genome ID | Shkoporov_2019_SRR9161590_NODE_297_length_22024_cov_5.203150 |
| BioSample | SAMN11893694 |
| Country | Ireland |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 30.55% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9612 |
| Virus hallmark genes (geNomad) | 1 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | -5.67 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 22,024 bps |
| GC content | 43.98% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 37 |
| CDS density | 90.51% |
| Average CDS length | 540.08 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |