| Genome information | |
|---|---|
| Genome ID | UHGV-1355235 |
| vOTU ID | vOTU-003712 |
| vOTU representative | No |
| Source dataset | GVD |
| Original genome ID | Shkoporov_2019_SRR9161502_NODE_1780_length_16355_cov_10.372331 |
| BioSample | SAMN11893780 |
| Country | Ireland |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 20.29% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 4 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9796 |
| Virus hallmark genes (geNomad) | 1 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 2.71 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 16,355 bps |
| GC content | 37.85% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 30 |
| CDS density | 88.27% |
| Average CDS length | 484.50 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |