| Genome information | |
|---|---|
| Genome ID | UHGV-1355352 |
| vOTU ID | vOTU-005011 |
| vOTU representative | No |
| Source dataset | GVD |
| Original genome ID | Shkoporov_2019_SRR9161552_NODE_41_length_24993_cov_8.202582 |
| BioSample | SAMN11893728 |
| Country | Ireland |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 42.07% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 6 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9820 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 6.29 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 24,993 bps |
| GC content | 39.85% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 54 |
| CDS density | 87.40% |
| Average CDS length | 407.67 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |