UHGV-1367800

Genome information

vOTU vOTU-002086

Genome length 44,209 bps

CDS count 76

Completeness 100.00% (complete)

geNomad score 0.9798

Prediction confidence Confident

Genome information
Genome ID	UHGV-1367800
vOTU ID	vOTU-002086
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0289960
BioSample	SAMEA3951648
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9798
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	58.99
Jumbo phage	No

Genome content
Genome length	44,209 bps
GC content	51.93%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	76
CDS density	90.81%
Average CDS length	532.78 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1367800_1	PHROG	phrog_18955	NA	unknown function
UHGV-1367800_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1367800_4	PHROG	phrog_27545	NA	unknown function
UHGV-1367800_4	UniRef90	UniRef90_C6LG78	Carbohydrate binding domain protein	NA
UHGV-1367800_4	eggNOG-mapper	742738.HMPREF9460_00363	NA	NA
UHGV-1367800_5	PHROG	phrog_863	tail fiber assembly	tail
UHGV-1367800_6	PHROG	phrog_13589	NA	unknown function
UHGV-1367800_6	eggNOG-mapper	411471.SUBVAR_06929	ATPase involved in DNA repair	NA
UHGV-1367800_6	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-1367800_7	UniRef90	UniRef90_UPI001C1090AB	collagen-like protein	NA
UHGV-1367800_7	eggNOG-mapper	1297617.JPJD01000099_gene2171	Collagen triple helix repeat protein	NA
UHGV-1367800_7	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-1367800_7	Structural annotation	PF10651, COG5456	NA	NA
UHGV-1367800_8	PHROG	phrog_24451	NA	unknown function
UHGV-1367800_8	eggNOG-mapper	931276.Cspa_c10290	NA	NA
UHGV-1367800_10	PHROG	phrog_32744	NA	unknown function
UHGV-1367800_10	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-1367800_10	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-1367800_11	PHROG	phrog_1194	NA	unknown function
UHGV-1367800_11	eggNOG-mapper	1226322.HMPREF1545_00060	NA	NA
UHGV-1367800_11	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1367800_12	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1367800_12	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-1367800_12	COG	COG1511	NA	NA
UHGV-1367800_12	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-1367800_13	PHROG	phrog_8545	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UHGV-1367800_13	UniRef90	UniRef90_UPI001D05CE4F	OB-fold putative lipoprotein	NA
UHGV-1367800_13	eggNOG-mapper	1203606.HMPREF1526_01637	tRNA_anti-like	NA
UHGV-1367800_13	Pfam	PF12869	tRNA_anti-like	tRNA_anti-like
UHGV-1367800_14	PHROG	phrog_706	NA	unknown function
UHGV-1367800_14	UniRef90	UniRef90_UPI001D069FB9	Gp15 family bacteriophage protein	NA
UHGV-1367800_14	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-1367800_14	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1367800_14	Structural annotation	PF06854	NA	NA
UHGV-1367800_15	PHROG	phrog_11299	NA	unknown function
UHGV-1367800_15	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-1367800_15	Structural annotation	PF10666	NA	NA
UHGV-1367800_16	PHROG	phrog_3099	NA	unknown function
UHGV-1367800_16	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-1367800_16	Structural annotation	PF10772, TIGR02126, COG3499	NA	NA
UHGV-1367800_17	PHROG	phrog_3266	tail completion	connector
UHGV-1367800_17	UniRef90	UniRef90_A0A2Z4QA01	Minor capsid protein	NA
UHGV-1367800_17	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-1367800_17	Structural annotation	PF12691	NA	NA
UHGV-1367800_18	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1367800_18	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-1367800_18	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-1367800_18	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1367800_18	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-1367800_19	PHROG	phrog_3366	NA	unknown function
UHGV-1367800_19	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-1367800_19	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-1367800_20	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1367800_20	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-1367800_21	eggNOG-mapper	1226322.HMPREF1545_00051	NA	NA
UHGV-1367800_22	PHROG	phrog_10	major head protein	head and packaging
UHGV-1367800_22	UniRef90	UniRef90_U2SBS0	Phage capsid family protein	NA
UHGV-1367800_22	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-1367800_22	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1367800_22	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1367800_22	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1367800_22	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1367800_23	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1367800_23	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-1367800_25	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1367800_25	UniRef90	UniRef90_UPI001D080D49	phage minor capsid protein	NA
UHGV-1367800_25	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-1367800_25	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1367800_25	COG	COG2369	NA	NA
UHGV-1367800_25	Structural annotation	PF06152	NA	NA
UHGV-1367800_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-1367800_26	UniRef90	UniRef90_UPI001D078D46	phage portal protein	NA
UHGV-1367800_26	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-1367800_26	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1367800_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1367800_28	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1367800_28	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-1367800_28	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-1367800_28	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-1367800_28	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1367800_28	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1367800_28	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1367800_28	COG	COG1783	Phage terminase large subunit	NA
UHGV-1367800_28	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1367800_29	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1367800_29	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1367800_29	UniRef90	UniRef90_UPI001D05F697	terminase small subunit	NA
UHGV-1367800_29	eggNOG-mapper	1316932.MHH_c17910	Terminase small subunit	NA
UHGV-1367800_29	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1367800_29	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1367800_30	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1367800_30	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-1367800_30	UniRef90	UniRef90_A0A7I8D1Y4	Putative P1-type antirepressor - phage associated	NA
UHGV-1367800_30	eggNOG-mapper	1232443.BAIA02000079_gene53	AntA/AntB antirepressor	NA
UHGV-1367800_30	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-1367800_30	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1367800_30	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-1367800_30	Structural annotation	PF03374, PF08346, TIGR02681, COG3645, COG3561	NA	NA
UHGV-1367800_32	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1367800_32	PHROG	phrog_4836	CII-like regulator	transcription regulation
UHGV-1367800_32	UniRef90	UniRef90_U2R0P8	DNA-binding helix-turn-helix protein	NA
UHGV-1367800_32	eggNOG-mapper	1226322.HMPREF1545_02890	Helix-turn-helix XRE-family like proteins	NA
UHGV-1367800_32	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1367800_32	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1367800_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1367800_33	UniRef90	UniRef90_A0A1C7FQT4	Transcriptional regulator	NA
UHGV-1367800_33	eggNOG-mapper	1226322.HMPREF1545_00039	sequence-specific DNA binding	NA
UHGV-1367800_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1367800_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1367800_33	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1367800_34	PHROG	phrog_924	NA	unknown function
UHGV-1367800_34	UniRef90	UniRef90_UPI0019214AF7	NA	NA
UHGV-1367800_34	eggNOG-mapper	155864.EDL933_3275	NA	NA
UHGV-1367800_34	Pfam	PF04448	NA	DUF551
UHGV-1367800_34	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1367800_34	Structural annotation	NF041588	NA	NA
UHGV-1367800_35	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1367800_35	UniRef90	UniRef90_A0A6L8SWJ4	AP2 domain-containing protein	NA
UHGV-1367800_35	eggNOG-mapper	411462.DORLON_00791	NA	NA
UHGV-1367800_39	PHROG	phrog_38832	NA	unknown function
UHGV-1367800_39	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-1367800_40	Structural annotation	NF000937	NA	NA
UHGV-1367800_41	PHROG	phrog_25732	NA	unknown function
UHGV-1367800_41	Structural annotation	NF011227	NA	NA
UHGV-1367800_43	PHROG	phrog_10714	NA	unknown function
UHGV-1367800_43	UniRef90	UniRef90_UPI001C3A10B1	Zinc ribbon domain-containing protein	NA
UHGV-1367800_43	eggNOG-mapper	742738.HMPREF9460_04055	NA	NA
UHGV-1367800_44	Structural annotation	PF12759	NA	NA
UHGV-1367800_45	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1367800_45	UniRef90	UniRef90_A0A6A8VJ62	NA	NA
UHGV-1367800_45	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-1367800_45	Pfam	PF06356	NA	DUF1064
UHGV-1367800_45	Structural annotation	PF06356	NA	NA
UHGV-1367800_47	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-1367800_47	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-1367800_47	UniRef90	UniRef90_A0A1C7FRV3	SF4 helicase domain-containing protein	NA
UHGV-1367800_47	eggNOG-mapper	1378168.N510_01441	NA	NA
UHGV-1367800_47	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1367800_47	COG	COG0305	Replicative DNA helicase	NA
UHGV-1367800_47	Structural annotation	PF03796, MF_04154, NF006606, COG0467	NA	NA
UHGV-1367800_48	PHROG	phrog_15768	NA	unknown function
UHGV-1367800_48	UniRef90	UniRef90_A0A1H8R574	Helix-turn-helix domain-containing protein	NA
UHGV-1367800_48	eggNOG-mapper	1158294.JOMI01000001_gene1618	NA	NA
UHGV-1367800_48	Structural annotation	PF04492, MF_01177, NF041413, COG5625	NA	NA
UHGV-1367800_49	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1367800_49	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1367800_49	UniRef90	UniRef90_A0A1C7FSG7	Single-stranded DNA-binding protein	NA
UHGV-1367800_49	eggNOG-mapper	445972.ANACOL_00151	Single-stranded DNA-binding protein	NA
UHGV-1367800_49	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1367800_49	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1367800_49	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1367800_49	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1367800_49	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1367800_50	PHROG	phrog_1389	NA	unknown function
UHGV-1367800_50	eggNOG-mapper	1347392.CCEZ01000060_gene3269	NA	NA
UHGV-1367800_50	Structural annotation	PF11056, TIGR04376, COG1842	NA	NA
UHGV-1367800_51	PHROG	phrog_14970	NA	unknown function
UHGV-1367800_51	UniRef90	UniRef90_UPI00164BFA28	Rad52/Rad22 family DNA repair protein	NA
UHGV-1367800_51	eggNOG-mapper	411469.EUBHAL_02677	double-strand break repair protein	NA
UHGV-1367800_51	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-1367800_51	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-1367800_51	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-1367800_52	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1367800_52	UniRef90	UniRef90_A0A1C5N4H2	Siphovirus Gp157	NA
UHGV-1367800_52	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-1367800_52	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1367800_52	Structural annotation	PF05565	NA	NA
UHGV-1367800_57	eggNOG-mapper	742738.HMPREF9460_00848	NA	NA
UHGV-1367800_57	Structural annotation	PF12728, TIGR01764	NA	NA
UHGV-1367800_62	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1367800_62	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1367800_62	UniRef90	UniRef90_UPI001D061BC2	helix-turn-helix domain-containing protein	NA
UHGV-1367800_62	eggNOG-mapper	1235797.C816_03553	DNA-binding helix-turn-helix protein	NA
UHGV-1367800_62	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1367800_62	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1367800_62	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1367800_64	KOfam	K19370	DNAJC22; DnaJ homolog subfamily C member 22	NA
UHGV-1367800_64	PHROG	phrog_10292	NA	unknown function
UHGV-1367800_64	UniRef90	UniRef90_A0A355UYQ5	TM2 domain-containing protein	NA
UHGV-1367800_64	eggNOG-mapper	1514668.JOOA01000002_gene3146	TM2 domain	NA
UHGV-1367800_64	Pfam	PF05154	TM2 domain	TM2
UHGV-1367800_64	COG	COG2314	NA	NA
UHGV-1367800_65	PHROG	phrog_33872	NA	unknown function
UHGV-1367800_66	KOfam	K14059	int; integrase	NA
UHGV-1367800_66	PHROG	phrog_1	integrase	integration and excision
UHGV-1367800_66	UniRef90	UniRef90_UPI001959BD31	site-specific integrase	NA
UHGV-1367800_66	eggNOG-mapper	1378168.N510_03298	Belongs to the 'phage' integrase family	NA
UHGV-1367800_66	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1367800_66	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1367800_66	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-1367800_67	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-1367800_68	eggNOG-mapper	1408437.JNJN01000043_gene802	NA	NA
UHGV-1367800_69	PHROG	phrog_16490	NA	unknown function
UHGV-1367800_69	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1367800_71	eggNOG-mapper	445972.ANACOL_01878	NA	NA
UHGV-1367800_73	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-1367800_74	PHROG	phrog_4105	NA	unknown function
UHGV-1367800_74	eggNOG-mapper	537013.CLOSTMETH_01753	NA	NA
UHGV-1367800_75	PHROG	phrog_1129	holin	lysis
UHGV-1367800_75	UniRef90	UniRef90_A0A1C7FPV3	Enolase	NA
UHGV-1367800_75	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1367800_75	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1367800_75	Structural annotation	PF06946	NA	NA
UHGV-1367800_76	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1367800_76	PHROG	phrog_18955	NA	unknown function
UHGV-1367800_76	UniRef90	UniRef90_A0A1C7FQI4	MurNAc-LAA domain-containing protein	NA
UHGV-1367800_76	eggNOG-mapper	1121344.JHZO01000003_gene744	Ami_3	NA
UHGV-1367800_76	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-1367800_76	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1367800_76	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1367800_76	Structural annotation	PF09992, PF01510, PF18342, NF008758, NF040678, COG5632, COG4632, COG4991	NA	NA