UHGV-1382147

Genome information

Genome length 39,563 bps

CDS count 65

Completeness 92.30% (high-quality)

geNomad score 0.9816

Prediction confidence Confident

Genome information
Genome ID	UHGV-1382147
vOTU ID	vOTU-070496
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0266288
BioSample	SAMEA3136688
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.30% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9816
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.21
Jumbo phage	No

Genome content
Genome length	39,563 bps
GC content	43.01%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	65
CDS density	92.31%
Average CDS length	566.03 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1382147_1	PHROG	phrog_4433	NA	unknown function
UHGV-1382147_1	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-1382147_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1382147_7	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1382147_7	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1382147_7	UniRef90	UniRef90_A0A6N9P2D0	Helix-turn-helix domain-containing protein	NA
UHGV-1382147_7	eggNOG-mapper	411470.RUMGNA_02181	DNA-binding helix-turn-helix protein	NA
UHGV-1382147_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1382147_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1382147_7	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-1382147_8	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1382147_8	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1382147_8	UniRef90	UniRef90_R5VN72	HTH cro/C1-type domain-containing protein	NA
UHGV-1382147_8	eggNOG-mapper	742817.HMPREF9449_00303	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1382147_8	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1382147_8	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-1382147_11	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1382147_11	PHROG	phrog_95	integrase	integration and excision
UHGV-1382147_11	UniRef90	UniRef90_A0A285PUJ0	Resolvase, N terminal domain	NA
UHGV-1382147_11	eggNOG-mapper	1235798.C817_01900	Resolvase, N terminal domain	NA
UHGV-1382147_11	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1382147_11	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1382147_11	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1382147_11	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-1382147_14	Structural annotation	PF12510	NA	NA
UHGV-1382147_15	PHROG	phrog_20016	NA	unknown function
UHGV-1382147_15	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-1382147_15	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1382147_16	PHROG	phrog_16490	NA	unknown function
UHGV-1382147_16	eggNOG-mapper	397290.C810_05212	NA	NA
UHGV-1382147_17	PHROG	phrog_22984	NA	unknown function
UHGV-1382147_18	PHROG	phrog_21718	NA	unknown function
UHGV-1382147_18	UniRef90	UniRef90_A0A285PT36	Consensus disorder prediction	NA
UHGV-1382147_18	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1382147_19	PHROG	phrog_3754	NA	unknown function
UHGV-1382147_19	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-1382147_20	eggNOG-mapper	1408311.JNJM01000003_gene2963	NA	NA
UHGV-1382147_21	UniRef90	UniRef90_A0A285PXT6	Winged helix-turn-helix DNA-binding domain	NA
UHGV-1382147_23	PHROG	phrog_14030	NA	unknown function
UHGV-1382147_23	UniRef90	UniRef90_G5FC83	SH3b domain-containing protein	NA
UHGV-1382147_23	eggNOG-mapper	1235800.C819_00464	NA	NA
UHGV-1382147_23	Structural annotation	PF08239, NF040678, COG4991	NA	NA
UHGV-1382147_24	PHROG	phrog_443	holin	lysis
UHGV-1382147_24	UniRef90	UniRef90_Q48T76	NA	NA
UHGV-1382147_24	eggNOG-mapper	1314.HKU360_01470	NA	NA
UHGV-1382147_24	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1382147_24	Structural annotation	PF16945	NA	NA
UHGV-1382147_25	PHROG	phrog_1863	NA	unknown function
UHGV-1382147_25	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-1382147_26	UniRef90	UniRef90_A0A3D3UB27	BppU_N domain-containing protein	NA
UHGV-1382147_26	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-1382147_26	Structural annotation	PF10651, NF038186	NA	NA
UHGV-1382147_27	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1382147_27	UniRef90	UniRef90_A0A7G9G6Y3	Phage tail protein	NA
UHGV-1382147_27	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-1382147_27	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1382147_27	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-1382147_27	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1382147_27	COG	COG4926	Phage-related protein	NA
UHGV-1382147_27	Structural annotation	PF14594, PF13884, TIGR01665, COG4926	NA	NA
UHGV-1382147_28	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1382147_28	UniRef90	UniRef90_A0A1C5W6B6	Phage-related protein	NA
UHGV-1382147_28	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-1382147_28	COG	COG4722	Phage-related protein YomH	NA
UHGV-1382147_28	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1382147_29	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-1382147_29	UniRef90	UniRef90_UPI001F456E2C	phage tail tape measure protein	NA
UHGV-1382147_29	eggNOG-mapper	641112.ACOK01000073_gene2904	Phage tail tape measure protein, TP901 family	NA
UHGV-1382147_29	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1382147_29	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1382147_29	COG	COG5283	Phage-related tail protein	NA
UHGV-1382147_29	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1382147_32	PHROG	phrog_885	major tail protein	tail
UHGV-1382147_32	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1382147_32	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-1382147_32	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1382147_33	Structural annotation	PF11367	NA	NA
UHGV-1382147_34	PHROG	phrog_1233	NA	unknown function
UHGV-1382147_34	eggNOG-mapper	665950.HMPREF1025_01361	NA	NA
UHGV-1382147_35	PHROG	phrog_17977	NA	unknown function
UHGV-1382147_35	UniRef90	UniRef90_A0A285PT57	Phage head-tail joining protein	NA
UHGV-1382147_35	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1382147_37	PHROG	phrog_247	major head protein	head and packaging
UHGV-1382147_37	UniRef90	UniRef90_A0A510K9Q4	Phage capsid protein	NA
UHGV-1382147_37	eggNOG-mapper	1151292.QEW_4535	NA	NA
UHGV-1382147_37	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-1382147_37	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-1382147_38	Structural annotation	PF06810	NA	NA
UHGV-1382147_39	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1382147_39	UniRef90	UniRef90_Q4ZBR0	ORF019	NA
UHGV-1382147_39	eggNOG-mapper	673376.F2VHW3_9CAUD	sequence-specific DNA binding transcription factor activity	NA
UHGV-1382147_40	UniRef90	UniRef90_A0A3A9EIF3	HK97 gp10 family phage protein	NA
UHGV-1382147_40	eggNOG-mapper	1504822.CCNO01000013_gene284	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1382147_40	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1382147_41	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-1382147_41	UniRef90	UniRef90_A0A285PUG1	Phage head morphogenesis domain	NA
UHGV-1382147_41	eggNOG-mapper	1280685.AUKC01000004_gene1632	Phage Mu protein F like protein	NA
UHGV-1382147_41	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1382147_41	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1382147_41	COG	COG2369	NA	NA
UHGV-1382147_41	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1382147_42	PHROG	phrog_64	portal protein	head and packaging
UHGV-1382147_42	UniRef90	UniRef90_A0A856HZB4	Phage portal protein	NA
UHGV-1382147_42	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1382147_42	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1382147_42	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1382147_43	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1382147_43	PHROG	phrog_10250	NA	unknown function
UHGV-1382147_43	UniRef90	UniRef90_A0A352CU28	PBSX family phage terminase large subunit	NA
UHGV-1382147_43	eggNOG-mapper	903814.ELI_3215	Phage terminase large subunit	NA
UHGV-1382147_43	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1382147_43	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1382147_43	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1382147_43	COG	COG1783	Phage terminase large subunit	NA
UHGV-1382147_43	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1382147_44	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1382147_44	PHROG	phrog_2606	terminase small subunit	head and packaging
UHGV-1382147_44	UniRef90	UniRef90_UPI001C10A749	terminase small subunit	NA
UHGV-1382147_44	eggNOG-mapper	478749.BRYFOR_07604	terminase, small subunit	NA
UHGV-1382147_44	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-1382147_44	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1382147_44	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1382147_44	Structural annotation	PF03592, PF10668, NF040601, COG3728	NA	NA
UHGV-1382147_46	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1382147_46	Structural annotation	PF05225, NF040595	NA	NA
UHGV-1382147_48	PHROG	phrog_7566	NA	unknown function
UHGV-1382147_48	eggNOG-mapper	411471.SUBVAR_05830	NA	NA
UHGV-1382147_51	PHROG	phrog_6072	NA	unknown function
UHGV-1382147_52	eggNOG-mapper	411459.RUMOBE_01111	NA	NA
UHGV-1382147_54	PHROG	phrog_9804	NA	unknown function
UHGV-1382147_54	UniRef90	UniRef90_F3ZVF9	Inhibitor_G39P domain-containing protein	NA
UHGV-1382147_54	eggNOG-mapper	697281.Mahau_0086	Loader and inhibitor of phage G40P	NA
UHGV-1382147_54	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-1382147_55	PHROG	phrog_10469	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1382147_55	UniRef90	UniRef90_A0A396P2Q5	Phage_rep_org_N domain-containing protein	NA
UHGV-1382147_55	eggNOG-mapper	457412.RSAG_04664	Phage replisome organizer, N-terminal domain protein	NA
UHGV-1382147_55	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-1382147_55	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-1382147_55	Structural annotation	PF09681, TIGR01714, COG3388	NA	NA
UHGV-1382147_57	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1382147_57	UniRef90	UniRef90_A0A285PU94	Recombinase NinB	NA
UHGV-1382147_57	eggNOG-mapper	1304866.K413DRAFT_1197	NA	NA
UHGV-1382147_57	Structural annotation	PF05772, NF007281	NA	NA
UHGV-1382147_59	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1382147_59	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1382147_59	UniRef90	UniRef90_UPI00188A4948	single-stranded DNA-binding protein	NA
UHGV-1382147_59	eggNOG-mapper	796942.HMPREF9623_02068	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1382147_59	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1382147_59	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1382147_59	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1382147_59	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1382147_59	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-1382147_60	eggNOG-mapper	991905.SL003B_3762	NA	NA
UHGV-1382147_61	PHROG	phrog_14970	NA	unknown function
UHGV-1382147_61	UniRef90	UniRef90_UPI00117BBF12	Rad52/Rad22 family DNA repair protein	NA
UHGV-1382147_61	eggNOG-mapper	411469.EUBHAL_02677	double-strand break repair protein	NA
UHGV-1382147_61	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-1382147_61	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-1382147_61	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-1382147_63	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1382147_63	UniRef90	UniRef90_A0A1C6CBG4	Siphovirus Gp157	NA
UHGV-1382147_63	eggNOG-mapper	699218.HMPREF0889_0310	Siphovirus Gp157	NA
UHGV-1382147_63	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1382147_63	Structural annotation	PF05565, NF002139	NA	NA