UHGV-1383287

Genome information

Genome length 24,269 bps

CDS count 37

Completeness 56.37% (medium-quality)

geNomad score 0.9776

Prediction confidence Confident

Genome information
Genome ID	UHGV-1383287
vOTU ID	vOTU-024818
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-4385322
BioSample	NA
Country	Russia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.37% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9776
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	60.51
Jumbo phage	No

Genome content
Genome length	24,269 bps
GC content	40.05%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	37
CDS density	94.52%
Average CDS length	622.54 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1383287_3	PHROG	phrog_2275	NA	unknown function
UHGV-1383287_3	eggNOG-mapper	1158602.I590_02971	NA	NA
UHGV-1383287_4	eggNOG-mapper	1140002.I570_02903	NA	NA
UHGV-1383287_6	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-1383287_6	UniRef90	UniRef90_A0A345FSU8	ArpU family transcriptional regulator	NA
UHGV-1383287_6	eggNOG-mapper	1158607.UAU_01741	NA	NA
UHGV-1383287_6	NCBIFam	TIGR01637.1	ArpU family phage packaging/lysis transcriptional regulator	NA
UHGV-1383287_6	Structural annotation	PF04545, TIGR01637, COG1342	NA	NA
UHGV-1383287_7	PHROG	phrog_1202	NA	unknown function
UHGV-1383287_7	eggNOG-mapper	565664.EFXG_01156	NA	NA
UHGV-1383287_7	Structural annotation	PF18789	NA	NA
UHGV-1383287_8	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1383287_8	PHROG	phrog_498	DNA methyltransferase	other
UHGV-1383287_8	UniRef90	UniRef90_S0S5S6	Adenine methyltransferase	NA
UHGV-1383287_8	eggNOG-mapper	1140002.I570_02906	DNA methylase	NA
UHGV-1383287_8	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1383287_8	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1383287_8	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1383287_8	COG	COG0863	DNA modification methylase	NA
UHGV-1383287_8	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-1383287_9	PHROG	phrog_1476	NA	unknown function
UHGV-1383287_9	UniRef90	UniRef90_A8ATN7	Gp79	NA
UHGV-1383287_9	eggNOG-mapper	1140002.I570_02907	NA	NA
UHGV-1383287_10	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-1383287_10	UniRef90	UniRef90_A0A376H1U7	Phage terminase small subunit	NA
UHGV-1383287_10	eggNOG-mapper	1140002.I570_02908	Phage terminase small subunit	NA
UHGV-1383287_10	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-1383287_10	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-1383287_10	COG	COG5484	NA	NA
UHGV-1383287_10	Structural annotation	PF10668, NF040601, COG5484	NA	NA
UHGV-1383287_11	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1383287_11	PHROG	phrog_10250	NA	unknown function
UHGV-1383287_11	UniRef90	UniRef90_A0A7H4KMV0	Terminase-like family protein	NA
UHGV-1383287_11	eggNOG-mapper	1432847.V5UQR5_9VIRU	Terminase-like family	NA
UHGV-1383287_11	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1383287_11	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1383287_11	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1383287_11	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1383287_12	PHROG	phrog_64	portal protein	head and packaging
UHGV-1383287_12	UniRef90	UniRef90_S1NAH2	SPP1 family phage portal protein	NA
UHGV-1383287_12	eggNOG-mapper	1139219.I569_01383	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1383287_12	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1383287_12	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-1383287_12	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-1383287_13	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1383287_13	UniRef90	UniRef90_A0A200HT95	Phage_Mu_F domain-containing protein	NA
UHGV-1383287_13	eggNOG-mapper	1139219.I569_01382	Phage Mu protein F like protein	NA
UHGV-1383287_13	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1383287_13	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1383287_13	COG	COG2369	NA	NA
UHGV-1383287_13	Structural annotation	PF04233, TIGR01641	NA	NA
UHGV-1383287_15	PHROG	phrog_5859	NA	unknown function
UHGV-1383287_15	eggNOG-mapper	1158604.I591_01773	NA	NA
UHGV-1383287_15	Structural annotation	PF03927, MF_02200, NF009840, COG3471	NA	NA
UHGV-1383287_16	PHROG	phrog_2932	head scaffolding protein	head and packaging
UHGV-1383287_16	UniRef90	UniRef90_UPI0009004F94	NA	NA
UHGV-1383287_16	eggNOG-mapper	764561.D7RWC8_9CAUD	aminoacyl-tRNA ligase activity	NA
UHGV-1383287_16	Pfam	PF14265	NA	DUF4355
UHGV-1383287_16	Structural annotation	PF14265	NA	NA
UHGV-1383287_17	PHROG	phrog_840	major head protein	head and packaging
UHGV-1383287_17	UniRef90	UniRef90_D2J061	Capsid protein	NA
UHGV-1383287_17	eggNOG-mapper	673839.D2J061_9CAUD	NA	NA
UHGV-1383287_17	Structural annotation	PF03864, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-1383287_18	PHROG	phrog_132	head-tail adaptor	connector
UHGV-1383287_18	UniRef90	UniRef90_UPI000F04AE4C	phage head-tail connector protein	NA
UHGV-1383287_18	eggNOG-mapper	1139219.I569_01377	Phage gp6-like head-tail connector protein	NA
UHGV-1383287_18	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1383287_18	Structural annotation	PF05135	NA	NA
UHGV-1383287_19	PHROG	phrog_348	minor head protein	head and packaging
UHGV-1383287_19	eggNOG-mapper	1158609.I586_00086	NA	NA
UHGV-1383287_19	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1383287_20	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1383287_20	UniRef90	UniRef90_UPI0010F438E4	HK97 gp10 family phage protein	NA
UHGV-1383287_20	eggNOG-mapper	565664.EFXG_01171	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1383287_20	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1383287_20	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1383287_20	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-1383287_21	PHROG	phrog_176	tail terminator	connector
UHGV-1383287_21	UniRef90	UniRef90_UPI00118564FA	NA	NA
UHGV-1383287_21	eggNOG-mapper	1486428.A0A097BY96_9CAUD	NA	NA
UHGV-1383287_21	Structural annotation	PF11367	NA	NA
UHGV-1383287_22	PHROG	phrog_238	major tail protein	tail
UHGV-1383287_22	UniRef90	UniRef90_A0A8B5VY31	Phage major tail protein, TP901-1 family	NA
UHGV-1383287_22	eggNOG-mapper	226185.EF_1285	Phage tail tube protein	NA
UHGV-1383287_22	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-1383287_22	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-1383287_22	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1383287_23	PHROG	phrog_183	tail chaperone protein	tail
UHGV-1383287_23	UniRef90	UniRef90_A0A1B4XN81	Tail assembly chaperone	NA
UHGV-1383287_23	eggNOG-mapper	1201292.DR75_349	Phage tail assembly chaperone protein, TAC	NA
UHGV-1383287_23	Pfam	PF12363	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
UHGV-1383287_23	Structural annotation	PF12363	NA	NA
UHGV-1383287_24	PHROG	phrog_441	tail assembly chaperone	tail
UHGV-1383287_24	eggNOG-mapper	226185.EF_1287	NA	NA
UHGV-1383287_25	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1383287_25	UniRef90	UniRef90_A0A8B5VYS3	Phage tail tape measure protein	NA
UHGV-1383287_25	eggNOG-mapper	35241.Q9AYV8_BPTU2	peptidoglycan catabolic process	NA
UHGV-1383287_25	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1383287_25	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1383287_26	PHROG	phrog_5163	minor tail protein	tail
UHGV-1383287_26	UniRef90	UniRef90_UPI0010F65349	phage tail family protein	NA
UHGV-1383287_26	eggNOG-mapper	1158610.UC3_03184	Phage tail protein	NA
UHGV-1383287_26	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1383287_26	COG	COG4722	Phage-related protein YomH	NA
UHGV-1383287_26	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-1383287_27	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1383287_27	UniRef90	UniRef90_UPI001A90A4C6	phage tail tip lysozyme	NA
UHGV-1383287_27	eggNOG-mapper	1158612.I580_01364	Prophage endopeptidase tail	NA
UHGV-1383287_27	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1383287_27	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1383287_27	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-1383287_27	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1383287_27	COG	COG4926	Phage-related protein	NA
UHGV-1383287_27	Structural annotation	PF14594, PF18013, TIGR01665, NF041249, COG4926	NA	NA
UHGV-1383287_28	PHROG	phrog_11857	NA	unknown function
UHGV-1383287_28	UniRef90	UniRef90_A0A1L8WTN7	Peptidase C51 domain-containing protein	NA
UHGV-1383287_28	eggNOG-mapper	1158607.UAU_01043	Phage minor structural protein	NA
UHGV-1383287_28	Pfam	PF05257	CHAP domain	CHAP
UHGV-1383287_28	COG	COG4926	Phage-related protein	NA
UHGV-1383287_28	Structural annotation	COG3942	NA	NA
UHGV-1383287_29	PHROG	phrog_6042	minor head protein	head and packaging
UHGV-1383287_29	UniRef90	UniRef90_A0A7U6L847	BppU_N domain-containing protein	NA
UHGV-1383287_29	eggNOG-mapper	1158607.UAU_01044	NA	NA
UHGV-1383287_29	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-1383287_29	Structural annotation	PF10651, NF040788	NA	NA
UHGV-1383287_30	PHROG	phrog_9625	NA	unknown function
UHGV-1383287_30	eggNOG-mapper	1158607.UAU_01045	NA	NA
UHGV-1383287_31	PHROG	phrog_6907	NA	unknown function
UHGV-1383287_31	UniRef90	UniRef90_A0A2T5D5H6	Collagen-like protein	NA
UHGV-1383287_31	eggNOG-mapper	1158607.UAU_01046	NA	NA
UHGV-1383287_32	PHROG	phrog_7911	tail protein	tail
UHGV-1383287_32	UniRef90	UniRef90_C9BVF1	Predicted protein	NA
UHGV-1383287_32	eggNOG-mapper	1201292.DR75_1497	NA	NA
UHGV-1383287_33	PHROG	phrog_1536	NA	unknown function
UHGV-1383287_33	eggNOG-mapper	1158607.UAU_01048	NA	NA
UHGV-1383287_34	PHROG	phrog_134	NA	unknown function
UHGV-1383287_34	UniRef90	UniRef90_A0A345FSS3	XkdX family protein	NA
UHGV-1383287_34	eggNOG-mapper	1158607.UAU_01049	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-1383287_34	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1383287_34	NCBIFam	TIGR01669.1	XkdX family protein	NA
UHGV-1383287_34	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1383287_35	PHROG	phrog_199	holin	lysis
UHGV-1383287_35	UniRef90	UniRef90_A0A7H4KLL2	Holin	NA
UHGV-1383287_35	eggNOG-mapper	1486428.A0A097BY69_9CAUD	Pfam:Phage_holin_4_1	NA
UHGV-1383287_35	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1383287_35	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1383287_36	PHROG	phrog_32897	NA	unknown function
UHGV-1383287_36	eggNOG-mapper	1158602.I590_01701	NA	NA
UHGV-1383287_37	PHROG	phrog_13463	endolysin	lysis
UHGV-1383287_37	UniRef90	UniRef90_R2RM83	NlpC/P60 domain-containing protein	NA
UHGV-1383287_37	eggNOG-mapper	1140002.I570_01424	Bacteriophage peptidoglycan hydrolase	NA
UHGV-1383287_37	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-1383287_37	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA