UHGV-1385324

Genome information

vOTU vOTU-020957

Genome length 22,245 bps

CDS count 30

Completeness 54.71% (medium-quality)

geNomad score 0.9817

Prediction confidence Confident

Genome information
Genome ID	UHGV-1385324
vOTU ID	vOTU-020957
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0163217
BioSample	NA
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.71% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9817
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.47
Jumbo phage	No

Genome content
Genome length	22,245 bps
GC content	49.49%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	30
CDS density	92.85%
Average CDS length	691.10 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1385324_2	PHROG	phrog_32198	NA	unknown function
UHGV-1385324_4	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1385324_4	eggNOG-mapper	1304866.K413DRAFT_0819	NA	NA
UHGV-1385324_5	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1385324_5	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1385324_5	UniRef90	UniRef90_R5FKE8	Terminase small subunit	NA
UHGV-1385324_5	eggNOG-mapper	742740.HMPREF9474_03499	Terminase Small Subunit	NA
UHGV-1385324_5	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1385324_5	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1385324_5	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1385324_6	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1385324_6	UniRef90	UniRef90_A0A6L9EPW1	HNHc domain-containing protein	NA
UHGV-1385324_6	eggNOG-mapper	1462526.BN990_03869	NUMOD4 motif	NA
UHGV-1385324_6	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1385324_6	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1385324_6	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1385324_7	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1385324_7	PHROG	phrog_10250	NA	unknown function
UHGV-1385324_7	UniRef90	UniRef90_A0A1C7G6C9	Terminase	NA
UHGV-1385324_7	eggNOG-mapper	742740.HMPREF9474_03500	Phage terminase, large subunit, PBSX family	NA
UHGV-1385324_7	COG	COG1783	Phage terminase large subunit	NA
UHGV-1385324_7	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1385324_8	PHROG	phrog_533	portal protein	head and packaging
UHGV-1385324_8	UniRef90	UniRef90_A0A1C7G7K7	Capsid protein	NA
UHGV-1385324_8	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-1385324_8	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1385324_9	PHROG	phrog_25639	NA	unknown function
UHGV-1385324_9	eggNOG-mapper	742740.HMPREF9474_03502	NA	NA
UHGV-1385324_10	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1385324_10	UniRef90	UniRef90_UPI00138AC1F0	minor capsid protein	NA
UHGV-1385324_10	eggNOG-mapper	742740.HMPREF9474_03503	Phage minor capsid protein 2	NA
UHGV-1385324_10	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1385324_10	Pfam	PF18451	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
UHGV-1385324_10	COG	COG2369	NA	NA
UHGV-1385324_10	Structural annotation	PF06152, PF03496, MF_04139, NF040688	NA	NA
UHGV-1385324_11	PHROG	phrog_1048	NA	unknown function
UHGV-1385324_11	UniRef90	UniRef90_A0A3E2UCS8	NA	NA
UHGV-1385324_11	eggNOG-mapper	457412.RSAG_01107	NA	NA
UHGV-1385324_11	Pfam	PF11195	NA	DUF2829
UHGV-1385324_11	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-1385324_11	Structural annotation	PF11195	NA	NA
UHGV-1385324_12	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1385324_12	eggNOG-mapper	742740.HMPREF9474_03504	NA	NA
UHGV-1385324_13	PHROG	phrog_212	major head protein	head and packaging
UHGV-1385324_13	UniRef90	UniRef90_A0A174WQG5	Phage capsid protein	NA
UHGV-1385324_13	eggNOG-mapper	469618.FVAG_01310	NA	NA
UHGV-1385324_13	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-1385324_14	eggNOG-mapper	573061.Clocel_3536	NA	NA
UHGV-1385324_15	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1385324_15	eggNOG-mapper	742740.HMPREF9474_03507	NA	NA
UHGV-1385324_16	PHROG	phrog_8710	NA	unknown function
UHGV-1385324_16	eggNOG-mapper	742740.HMPREF9474_03508	NA	NA
UHGV-1385324_16	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1385324_17	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1385324_17	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-1385324_18	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-1385324_18	UniRef90	UniRef90_UPI001D068DAC	minor capsid protein	NA
UHGV-1385324_18	eggNOG-mapper	742740.HMPREF9474_03510	NA	NA
UHGV-1385324_18	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1385324_18	Structural annotation	PF12691, COG5003	NA	NA
UHGV-1385324_19	PHROG	phrog_820	major tail protein	tail
UHGV-1385324_19	eggNOG-mapper	742740.HMPREF9474_03511	domain, Protein	NA
UHGV-1385324_19	COG	COG5492	NA	NA
UHGV-1385324_19	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1385324_20	PHROG	phrog_8300	NA	unknown function
UHGV-1385324_20	eggNOG-mapper	742740.HMPREF9474_03512	NA	NA
UHGV-1385324_20	Structural annotation	PF06854	NA	NA
UHGV-1385324_21	PHROG	phrog_8355	NA	unknown function
UHGV-1385324_21	UniRef90	UniRef90_UPI001D07612A	bacteriophage Gp15 family protein	NA
UHGV-1385324_21	eggNOG-mapper	742740.HMPREF9474_03513	NA	NA
UHGV-1385324_21	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1385324_21	Structural annotation	PF06854	NA	NA
UHGV-1385324_22	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1385324_22	UniRef90	UniRef90_A0A174SV65	Phage-like protein	NA
UHGV-1385324_22	eggNOG-mapper	742740.HMPREF9474_03514	tape measure	NA
UHGV-1385324_22	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1385324_22	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1385324_23	PHROG	phrog_1194	NA	unknown function
UHGV-1385324_23	eggNOG-mapper	742740.HMPREF9474_03515	NA	NA
UHGV-1385324_23	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1385324_24	PHROG	phrog_13879	NA	unknown function
UHGV-1385324_24	eggNOG-mapper	742740.HMPREF9474_03516	NA	NA
UHGV-1385324_24	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-1385324_25	PHROG	phrog_18725	NA	unknown function
UHGV-1385324_25	eggNOG-mapper	742740.HMPREF9474_03517	NA	NA
UHGV-1385324_26	eggNOG-mapper	411902.CLOBOL_00122	NA	NA
UHGV-1385324_27	UniRef90	UniRef90_A0A396Q326	Fibronectin type-III domain-containing protein	NA
UHGV-1385324_27	eggNOG-mapper	742733.HMPREF9469_00967	NA	NA
UHGV-1385324_27	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-1385324_27	Structural annotation	PF21722, PF20942, TIGR04488, COG3401	NA	NA
UHGV-1385324_28	eggNOG-mapper	742733.HMPREF9469_00968	NA	NA
UHGV-1385324_30	eggNOG-mapper	411902.CLOBOL_00117	Bacteriophage holin family	NA
UHGV-1385324_30	COG	COG4824	Phage-related holin (Lysis protein)	NA