UHGV-1391686

Genome information

vOTU vOTU-019428

Genome length 30,361 bps

CDS count 48

Completeness 67.35% (medium-quality)

geNomad score 0.9829

Prediction confidence Confident

Genome information
Genome ID	UHGV-1391686
vOTU ID	vOTU-019428
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0213369
BioSample	SAMN05414939
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.35% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9829
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.05
Jumbo phage	No

Genome content
Genome length	30,361 bps
GC content	42.81%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	48
CDS density	91.67%
Average CDS length	581.81 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1391686_2	PHROG	phrog_6616	tail protein	tail
UHGV-1391686_2	UniRef90	UniRef90_UPI001D0E203F	tail fiber domain-containing protein	NA
UHGV-1391686_2	eggNOG-mapper	33035.JPJF01000043_gene1002	NA	NA
UHGV-1391686_2	Pfam	PF21470	Minor structural protein 5-like, C-terminal domain	BppU-like_C
UHGV-1391686_2	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-1391686_2	Structural annotation	PF05113, PF01835, PF03921, NF033848, COG3500	NA	NA
UHGV-1391686_3	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1391686_4	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1391686_4	UniRef90	UniRef90_A0A173R880	Phage-related protein	NA
UHGV-1391686_4	eggNOG-mapper	476272.RUMHYD_01785	phage tail tape measure protein	NA
UHGV-1391686_4	COG	COG1511	NA	NA
UHGV-1391686_5	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1391686_5	UniRef90	UniRef90_UPI00155E23B1	NUMOD4 domain-containing protein	NA
UHGV-1391686_5	eggNOG-mapper	1206110.L0P6F5_9CAUD	sequence-specific DNA binding transcription factor activity	NA
UHGV-1391686_5	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1391686_5	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1391686_5	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1391686_5	Structural annotation	PF07463, PF07453	NA	NA
UHGV-1391686_6	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1391686_6	eggNOG-mapper	476272.RUMHYD_01785	phage tail tape measure protein	NA
UHGV-1391686_6	COG	COG1511	NA	NA
UHGV-1391686_6	Structural annotation	PF20155	NA	NA
UHGV-1391686_7	PHROG	phrog_706	NA	unknown function
UHGV-1391686_7	UniRef90	UniRef90_UPI001BAD00AD	Gp15 family bacteriophage protein	NA
UHGV-1391686_7	eggNOG-mapper	411459.RUMOBE_01383	Bacteriophage Gp15 protein	NA
UHGV-1391686_7	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1391686_7	Structural annotation	PF06854	NA	NA
UHGV-1391686_8	PHROG	phrog_11299	NA	unknown function
UHGV-1391686_8	eggNOG-mapper	33035.JPJF01000106_gene3125	NA	NA
UHGV-1391686_8	Structural annotation	PF10666	NA	NA
UHGV-1391686_9	PHROG	phrog_3099	NA	unknown function
UHGV-1391686_9	eggNOG-mapper	411902.CLOBOL_00129	NA	NA
UHGV-1391686_9	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1391686_10	PHROG	phrog_3266	tail completion	connector
UHGV-1391686_10	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-1391686_10	Structural annotation	PF12691	NA	NA
UHGV-1391686_11	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1391686_11	UniRef90	UniRef90_UPI000E4989EB	minor capsid protein	NA
UHGV-1391686_11	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-1391686_11	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1391686_11	Structural annotation	PF11114	NA	NA
UHGV-1391686_12	PHROG	phrog_3366	NA	unknown function
UHGV-1391686_12	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-1391686_12	Structural annotation	PF20536, COG5614	NA	NA
UHGV-1391686_13	PHROG	phrog_18218	NA	unknown function
UHGV-1391686_13	UniRef90	UniRef90_A0A8D9PGR5	Holin	NA
UHGV-1391686_13	eggNOG-mapper	411902.CLOBOL_03424	NA	NA
UHGV-1391686_13	Structural annotation	PF06946	NA	NA
UHGV-1391686_14	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1391686_14	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-1391686_15	PHROG	phrog_544	major head protein	head and packaging
UHGV-1391686_15	UniRef90	UniRef90_A0A395X7A1	S-l_SbsC_C domain-containing protein	NA
UHGV-1391686_15	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-1391686_15	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-1391686_15	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1391686_16	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1391686_16	UniRef90	UniRef90_UPI001D14C9C8	phage scaffolding protein	NA
UHGV-1391686_16	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-1391686_16	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1391686_16	Structural annotation	PF06810	NA	NA
UHGV-1391686_18	PHROG	phrog_28802	NA	unknown function
UHGV-1391686_18	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-1391686_19	PHROG	phrog_20016	NA	unknown function
UHGV-1391686_19	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1391686_19	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-1391686_19	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1391686_20	PHROG	phrog_16490	NA	unknown function
UHGV-1391686_20	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-1391686_21	PHROG	phrog_22984	NA	unknown function
UHGV-1391686_22	PHROG	phrog_21718	NA	unknown function
UHGV-1391686_22	eggNOG-mapper	476272.RUMHYD_01768	NA	NA
UHGV-1391686_23	AcrCatalog	cluster_37488	NA	NA
UHGV-1391686_24	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-1391686_24	PHROG	phrog_2104	NA	unknown function
UHGV-1391686_24	UniRef90	UniRef90_A0A412ELA1	Helix-turn-helix domain-containing protein	NA
UHGV-1391686_24	eggNOG-mapper	1410625.JHWK01000002_gene45	Helix-turn-helix XRE-family like proteins	NA
UHGV-1391686_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1391686_24	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-1391686_24	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-1391686_25	UniRef90	UniRef90_S2ZLJ4	HTH cro/C1-type domain-containing protein	NA
UHGV-1391686_25	eggNOG-mapper	411470.RUMGNA_03786	Helix-turn-helix XRE-family like proteins	NA
UHGV-1391686_25	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1391686_26	UniRef90	UniRef90_A0A395X7A4	CTP synthase	NA
UHGV-1391686_26	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-1391686_27	PHROG	phrog_3754	NA	unknown function
UHGV-1391686_27	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-1391686_28	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1391686_28	UniRef90	UniRef90_A0A395X791	Phage capsid protein	NA
UHGV-1391686_28	eggNOG-mapper	476272.RUMHYD_01761	Phage minor capsid protein 2	NA
UHGV-1391686_28	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1391686_28	COG	COG2369	NA	NA
UHGV-1391686_28	Structural annotation	PF06152	NA	NA
UHGV-1391686_29	PHROG	phrog_533	portal protein	head and packaging
UHGV-1391686_29	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-1391686_29	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-1391686_29	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1391686_30	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1391686_30	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1391686_30	UniRef90	UniRef90_A0A395X9V4	PBSX family phage terminase large subunit	NA
UHGV-1391686_30	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-1391686_30	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1391686_30	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1391686_30	COG	COG1783	Phage terminase large subunit	NA
UHGV-1391686_30	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1391686_31	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-1391686_31	UniRef90	UniRef90_UPI001F487344	DNA-packaging protein	NA
UHGV-1391686_31	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-1391686_31	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-1391686_31	Structural annotation	PF16677	NA	NA
UHGV-1391686_32	eggNOG-mapper	397288.C806_00098	NA	NA
UHGV-1391686_34	eggNOG-mapper	97139.C824_05979	NA	NA
UHGV-1391686_35	PHROG	phrog_20593	NA	unknown function
UHGV-1391686_37	eggNOG-mapper	476272.RUMHYD_01751	NA	NA
UHGV-1391686_37	AcrCatalog	cluster_11670	NA	NA
UHGV-1391686_39	PHROG	phrog_15198	NA	unknown function
UHGV-1391686_39	UniRef90	UniRef90_UPI00156ED5AF	NA	NA
UHGV-1391686_39	eggNOG-mapper	478749.BRYFOR_07594	NA	NA
UHGV-1391686_39	Pfam	PF04448	NA	DUF551
UHGV-1391686_40	eggNOG-mapper	457412.RSAG_01159	NA	NA
UHGV-1391686_40	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-1391686_41	PHROG	phrog_4601	NA	unknown function
UHGV-1391686_41	Structural annotation	PF17888	NA	NA
UHGV-1391686_42	Structural annotation	COG4446	NA	NA
UHGV-1391686_43	UniRef90	UniRef90_UPI001C0F2DCC	Lar family restriction alleviation protein	NA
UHGV-1391686_44	Structural annotation	NF041070	NA	NA
UHGV-1391686_45	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1391686_45	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1391686_45	UniRef90	UniRef90_UPI0006D549B2	helix-turn-helix domain-containing protein	NA
UHGV-1391686_45	eggNOG-mapper	663278.Ethha_0519	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-1391686_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1391686_45	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1391686_45	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1391686_47	Structural annotation	PF04936	NA	NA
UHGV-1391686_48	PHROG	phrog_3502	NA	unknown function
UHGV-1391686_48	UniRef90	UniRef90_A0A412EKY9	Winged helix-turn-helix transcriptional regulator	NA
UHGV-1391686_48	eggNOG-mapper	525256.HMPREF0091_10731	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-1391686_48	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-1391686_48	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1391686_48	Structural annotation	PF01726, MF_00732, TIGR00738, COG0640	NA	NA