UHGV-1410698

Genome information

Genome length 25,094 bps

CDS count 36

Completeness 100.00% (complete)

geNomad score 0.9645

Prediction confidence Confident

Genome information
Genome ID	UHGV-1410698
vOTU ID	vOTU-002303
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0183678
BioSample	NA
Country	Peru
Virus prediction confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9645
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	11.36
Jumbo phage	No

Genome content
Genome length	25,094 bps
GC content	29.50%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	36
CDS density	91.30%
Average CDS length	638.83 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1410698_1	PHROG	phrog_297	holin	lysis
UHGV-1410698_1	UniRef90	UniRef90_A0A522AS61	CHAP domain-containing protein	NA
UHGV-1410698_1	eggNOG-mapper	411462.DORLON_00669	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-1410698_1	Pfam	PF05257	CHAP domain	CHAP
UHGV-1410698_1	Pfam	PF07538	Clostridial hydrophobic W	ChW
UHGV-1410698_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1410698_1	Structural annotation	PF05382, TIGR02594, COG5492, COG3942	NA	NA
UHGV-1410698_7	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1410698_7	eggNOG-mapper	526218.Sterm_1269	Phage-related minor tail protein	NA
UHGV-1410698_7	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1410698_16	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1410698_16	COG	COG2369	NA	NA
UHGV-1410698_19	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1410698_19	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1410698_19	UniRef90	UniRef90_A0A0X8KME6	Terminase	NA
UHGV-1410698_19	eggNOG-mapper	646413.C5IUJ1_9CAUD	Pfam:Terminase_3C	NA
UHGV-1410698_19	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1410698_19	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1410698_20	KOfam	K21527	mom; adenine modification enzyme [EC:2.3.1.-]	NA
UHGV-1410698_20	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-1410698_20	UniRef90	UniRef90_UPI0008D97699	protein Mom	NA
UHGV-1410698_20	eggNOG-mapper	663241.C9E2P8_9CAUD	NA	NA
UHGV-1410698_20	Structural annotation	PF16092, MF_02210, NF007025, COG0456	NA	NA
UHGV-1410698_21	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1410698_21	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1410698_21	eggNOG-mapper	1118057.CAGX01000043_gene497	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-1410698_21	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1410698_21	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1410698_21	COG	COG0863	DNA modification methylase	NA
UHGV-1410698_21	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-1410698_23	PHROG	phrog_284	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1410698_23	UniRef90	UniRef90_UPI001BD8AA48	Metallophosphoesterase family protein	NA
UHGV-1410698_27	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1410698_27	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1410698_27	UniRef90	UniRef90_A0A096CX01	Recombinase RecT	NA
UHGV-1410698_27	eggNOG-mapper	698769.JFBD01000002_gene2770	RecT family	NA
UHGV-1410698_27	Pfam	PF03837	RecT family	RecT
UHGV-1410698_27	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1410698_27	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1410698_27	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-1410698_31	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1410698_31	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1410698_31	UniRef90	UniRef90_F1LGM2	Single-stranded DNA-binding protein	NA
UHGV-1410698_31	eggNOG-mapper	1408416.JNJT01000009_gene1279	single-stranded DNA binding	NA
UHGV-1410698_31	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1410698_31	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1410698_31	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1410698_31	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1410698_31	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-1410698_33	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1410698_33	UniRef90	UniRef90_A5TX20	Possible bacteriophage endonuclease	NA
UHGV-1410698_33	eggNOG-mapper	393480.FNP_1672	YqaJ viral recombinase family	NA
UHGV-1410698_33	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-1410698_33	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-1410698_33	Structural annotation	PF10926, MF_03030, TIGR03033, COG5377	NA	NA