UHGV-1427383

Genome information

vOTU vOTU-021950

Genome length 20,747 bps

CDS count 27

Completeness 65.02% (medium-quality)

geNomad score 0.9809

Prediction confidence Confident

Genome information
Genome ID	UHGV-1427383
vOTU ID	vOTU-021950
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0151932
BioSample	NA
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.02% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9809
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.01
Jumbo phage	No

Genome content
Genome length	20,747 bps
GC content	61.35%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	27
CDS density	95.12%
Average CDS length	733.67 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1427383_1	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1427383_1	eggNOG-mapper	742738.HMPREF9460_00867	NA	NA
UHGV-1427383_2	UniRef90	UniRef90_UPI001A9BD6FA	cysteine-rich KTR domain-containing protein	NA
UHGV-1427383_2	eggNOG-mapper	658086.HMPREF0994_02536	Cysteine-rich KTR	NA
UHGV-1427383_2	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-1427383_3	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1427383_3	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1427383_3	UniRef90	UniRef90_A0A3D1VCB5	Restriction endonuclease	NA
UHGV-1427383_3	eggNOG-mapper	1145276.T479_20000	HNH nucleases	NA
UHGV-1427383_3	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1427383_3	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1427383_4	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-1427383_4	UniRef90	UniRef90_R6ETV2	Phage terminase small subunit P27 family	NA
UHGV-1427383_4	eggNOG-mapper	596315.HMPREF0634_0388	Phage terminase, small subunit	NA
UHGV-1427383_4	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1427383_4	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1427383_5	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1427383_5	UniRef90	UniRef90_A0A3D1VAR5	Terminase	NA
UHGV-1427383_5	eggNOG-mapper	1226322.HMPREF1545_00113	Phage Terminase	NA
UHGV-1427383_5	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1427383_5	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1427383_5	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1427383_5	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-1427383_6	PHROG	phrog_12	portal protein	head and packaging
UHGV-1427383_6	UniRef90	UniRef90_A0A3D1VH02	Phage portal protein	NA
UHGV-1427383_6	eggNOG-mapper	1121423.JONT01000042_gene1421	Phage portal protein, HK97 family	NA
UHGV-1427383_6	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1427383_6	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1427383_6	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1427383_6	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1427383_7	KOfam	K06904	NA	NA
UHGV-1427383_7	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1427383_7	UniRef90	UniRef90_A0A3D1VA27	HK97 family phage prohead protease	NA
UHGV-1427383_7	eggNOG-mapper	1235798.C817_04584	Phage prohead protease, HK97 family	NA
UHGV-1427383_7	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1427383_7	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1427383_7	COG	COG3740	Phage head maturation protease	NA
UHGV-1427383_7	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1427383_8	PHROG	phrog_10	major head protein	head and packaging
UHGV-1427383_8	UniRef90	UniRef90_A0A3D1VAZ0	Phage major capsid protein	NA
UHGV-1427383_8	eggNOG-mapper	642492.Clole_0744	phage major capsid protein, HK97 family	NA
UHGV-1427383_8	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1427383_8	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1427383_8	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1427383_8	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1427383_9	PHROG	phrog_2550	NA	unknown function
UHGV-1427383_9	eggNOG-mapper	588581.Cpap_1271	NA	NA
UHGV-1427383_9	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1427383_10	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-1427383_10	UniRef90	UniRef90_A0A3D1VD59	Phage head-tail adapter protein	NA
UHGV-1427383_10	eggNOG-mapper	913865.DOT_5630	NA	NA
UHGV-1427383_10	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1427383_11	UniRef90	UniRef90_UPI00156FE9DA	HK97 gp10 family phage protein	NA
UHGV-1427383_11	eggNOG-mapper	1035189.HMPREF9954_1091	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1427383_11	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1427383_12	Structural annotation	PF05657	NA	NA
UHGV-1427383_13	PHROG	phrog_2175	protein with Ig domain	other
UHGV-1427383_13	eggNOG-mapper	86416.Clopa_0346	NA	NA
UHGV-1427383_13	Pfam	PF00061	Lipocalin / cytosolic fatty-acid binding protein family	Lipocalin
UHGV-1427383_13	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-1427383_14	eggNOG-mapper	411468.CLOSCI_00542	NA	NA
UHGV-1427383_14	Structural annotation	PF17388	NA	NA
UHGV-1427383_15	eggNOG-mapper	1219626.HMPREF1639_07460	NA	NA
UHGV-1427383_16	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-1427383_16	UniRef90	UniRef90_A0A3S4X6P5	Phage-related protein	NA
UHGV-1427383_16	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-1427383_16	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1427383_16	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1427383_16	Structural annotation	COG5280	NA	NA
UHGV-1427383_17	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-1427383_17	COG	COG4722	Phage-related protein YomH	NA
UHGV-1427383_17	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1427383_18	PHROG	phrog_3558	tail protein	tail
UHGV-1427383_18	UniRef90	UniRef90_A0A3D1VAY1	Prophage_tail domain-containing protein	NA
UHGV-1427383_18	eggNOG-mapper	1111121.HMPREF1247_1242	Prophage endopeptidase tail	NA
UHGV-1427383_18	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1427383_18	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1427383_18	COG	COG4926	Phage-related protein	NA
UHGV-1427383_18	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1427383_19	eggNOG-mapper	411473.RUMCAL_00420	nuclear chromosome segregation	NA
UHGV-1427383_19	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-1427383_19	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1427383_20	Structural annotation	PF00629, NF033675	NA	NA
UHGV-1427383_21	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1427383_21	PHROG	phrog_1794	amidase	lysis
UHGV-1427383_21	UniRef90	UniRef90_R5AZE6	N-acetylmuramoyl-L-alanine amidase family 2	NA
UHGV-1427383_21	eggNOG-mapper	1235800.C819_03946	Ami_2	NA
UHGV-1427383_21	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1427383_21	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1427383_21	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1427383_22	PHROG	phrog_1863	NA	unknown function
UHGV-1427383_22	UniRef90	UniRef90_UPI001F223E8B	hemolysin XhlA family protein	NA
UHGV-1427383_22	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-1427383_23	PHROG	phrog_1129	holin	lysis
UHGV-1427383_23	UniRef90	UniRef90_A0A8J6J3M3	Phage holin family protein	NA
UHGV-1427383_23	eggNOG-mapper	742740.HMPREF9474_03522	NA	NA
UHGV-1427383_23	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1427383_23	Structural annotation	PF06946	NA	NA
UHGV-1427383_24	UniRef90	UniRef90_A0A4R1QMH6	HTH cro/C1-type domain-containing protein	NA
UHGV-1427383_24	eggNOG-mapper	445972.ANACOL_00210	NA	NA
UHGV-1427383_24	Pfam	PF13412	Winged helix-turn-helix DNA-binding	HTH_24
UHGV-1427383_24	Structural annotation	PF13560, TIGR02612, COG1396	NA	NA
UHGV-1427383_27	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1427383_27	PHROG	phrog_95	integrase	integration and excision
UHGV-1427383_27	UniRef90	UniRef90_A0A417HSQ2	Recombinase family protein	NA
UHGV-1427383_27	eggNOG-mapper	1356854.N007_18555	Recombinase	NA
UHGV-1427383_27	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1427383_27	Pfam	PF07508	Recombinase	Recombinase
UHGV-1427383_27	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1427383_27	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA