UHGV-1445524

Genome information

vOTU vOTU-020095

Genome length 28,024 bps

CDS count 42

Completeness 61.06% (medium-quality)

geNomad score 0.9782

Prediction confidence Confident

Genome information
Genome ID	UHGV-1445524
vOTU ID	vOTU-020095
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0200285
BioSample	SAMN03418259
Country	Tanzania
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.06% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	26
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9782
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.89
Jumbo phage	No

Genome content
Genome length	28,024 bps
GC content	48.95%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	42
CDS density	96.57%
Average CDS length	648.50 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1445524_2	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1445524_2	UniRef90	UniRef90_A0A849CSI6	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-1445524_2	eggNOG-mapper	1262914.BN533_00791	DNA-templated transcription, initiation	NA
UHGV-1445524_2	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-1445524_2	Structural annotation	PF06530, TIGR01636, COG2739	NA	NA
UHGV-1445524_8	KOfam	K11044	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	NA
UHGV-1445524_8	PHROG	phrog_16625	NA	unknown function
UHGV-1445524_8	UniRef90	UniRef90_A0A645CFN4	ADPrib_exo_Tox domain-containing protein	NA
UHGV-1445524_8	eggNOG-mapper	563192.HMPREF0179_00384	Phage Mu protein F like protein	NA
UHGV-1445524_8	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-1445524_8	COG	COG2369	NA	NA
UHGV-1445524_11	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-1445524_11	PHROG	phrog_498	DNA methyltransferase	other
UHGV-1445524_11	UniRef90	UniRef90_A0A1Q6RAE5	Methyltransferase	NA
UHGV-1445524_11	eggNOG-mapper	226185.EF_2114	DNA methylase	NA
UHGV-1445524_11	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1445524_11	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1445524_11	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1445524_11	COG	COG0863	DNA modification methylase	NA
UHGV-1445524_11	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-1445524_12	PHROG	phrog_2412	NA	unknown function
UHGV-1445524_12	UniRef90	UniRef90_UPI001106D0BC	KGG domain-containing protein	NA
UHGV-1445524_12	eggNOG-mapper	742723.HMPREF9477_00912	NA	NA
UHGV-1445524_13	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1445524_13	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1445524_13	UniRef90	UniRef90_A0A1Q6RAF0	Terminase	NA
UHGV-1445524_13	eggNOG-mapper	1123288.SOV_2c10550	Terminase-like family	NA
UHGV-1445524_13	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1445524_13	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1445524_13	COG	COG1783	Phage terminase large subunit	NA
UHGV-1445524_13	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1445524_14	KOfam	K09961	NA	NA
UHGV-1445524_14	PHROG	phrog_146	portal protein	head and packaging
UHGV-1445524_14	UniRef90	UniRef90_UPI000CF8744B	NA	NA
UHGV-1445524_14	eggNOG-mapper	936573.HMPREF1147_1323	NA	NA
UHGV-1445524_14	Pfam	PF06381	Anti-CBASS protein Acb1-like	Abc1-like
UHGV-1445524_14	NCBIFam	TIGR01555.1	phage-associated protein, HI1409 family	NA
UHGV-1445524_14	COG	COG3567	NA	NA
UHGV-1445524_14	Structural annotation	PF06381, MF_04135, TIGR01555, COG3567	NA	NA
UHGV-1445524_16	PHROG	phrog_324	head morphogenesis	head and packaging
UHGV-1445524_16	UniRef90	UniRef90_A0A1Q6RAG2	Phage_Mu_F domain-containing protein	NA
UHGV-1445524_16	eggNOG-mapper	1211817.CCAT010000003_gene238	Phage Mu protein F like protein	NA
UHGV-1445524_16	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1445524_16	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1445524_16	COG	COG2369	NA	NA
UHGV-1445524_16	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-1445524_17	KOfam	K09960	NA	NA
UHGV-1445524_17	PHROG	phrog_16985	NA	unknown function
UHGV-1445524_17	UniRef90	UniRef90_UPI000CF9DD55	NA	NA
UHGV-1445524_17	eggNOG-mapper	1123288.SOV_2c10610	NA	NA
UHGV-1445524_17	Pfam	PF09979	NA	DUF2213
UHGV-1445524_17	COG	COG3566	NA	NA
UHGV-1445524_17	Structural annotation	PF09979, TIGR01543, COG3566	NA	NA
UHGV-1445524_18	PHROG	phrog_563	virion structural protein	head and packaging
UHGV-1445524_18	UniRef90	UniRef90_A0A0U1KXM2	Putative bacteriophage protein	NA
UHGV-1445524_18	eggNOG-mapper	1415774.U728_3750	NA	NA
UHGV-1445524_18	Structural annotation	PF09956	NA	NA
UHGV-1445524_19	PHROG	phrog_264	major head protein	head and packaging
UHGV-1445524_19	UniRef90	UniRef90_UPI00190EF81E	NA	NA
UHGV-1445524_19	eggNOG-mapper	1415774.U728_3749	NA	NA
UHGV-1445524_19	Pfam	PF09950	NA	DUF2184
UHGV-1445524_19	COG	COG4834	NA	NA
UHGV-1445524_19	Structural annotation	PF09950, MF_04113, TIGR01554, COG4834	NA	NA
UHGV-1445524_21	PHROG	phrog_302	virion structural protein	head and packaging
UHGV-1445524_21	UniRef90	UniRef90_A0A354WRG8	NA	NA
UHGV-1445524_21	eggNOG-mapper	1415774.U728_3747	NA	NA
UHGV-1445524_21	Pfam	PF13262	NA	DUF4054
UHGV-1445524_21	Structural annotation	PF13262	NA	NA
UHGV-1445524_22	PHROG	phrog_222	tail protein	tail
UHGV-1445524_22	UniRef90	UniRef90_C9LU87	Putative bacteriophage protein	NA
UHGV-1445524_22	eggNOG-mapper	1123288.SOV_2c10660	NA	NA
UHGV-1445524_23	PHROG	phrog_939	head protein	head and packaging
UHGV-1445524_23	eggNOG-mapper	1123288.SOV_2c10670	NA	NA
UHGV-1445524_23	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1445524_24	PHROG	phrog_1973	NA	unknown function
UHGV-1445524_24	eggNOG-mapper	864563.HMPREF9166_1247	NA	NA
UHGV-1445524_24	Structural annotation	PF16724	NA	NA
UHGV-1445524_25	PHROG	phrog_205	virion structural protein	head and packaging
UHGV-1445524_25	UniRef90	UniRef90_UPI000CF84C55	NA	NA
UHGV-1445524_25	eggNOG-mapper	1123288.SOV_2c10690	NA	NA
UHGV-1445524_25	Pfam	PF11863	NA	DUF3383
UHGV-1445524_25	Structural annotation	PF11863, COG3497	NA	NA
UHGV-1445524_26	PHROG	phrog_280	virion structural protein	head and packaging
UHGV-1445524_26	UniRef90	UniRef90_A0A412CGT4	NA	NA
UHGV-1445524_26	eggNOG-mapper	1123288.SOV_2c10710	NA	NA
UHGV-1445524_26	Pfam	PF11681	Bacteriophage KPP10, Structural protein ORF10	KPP10_Orf10
UHGV-1445524_26	Structural annotation	PF11681, TIGR02241, COG5437	NA	NA
UHGV-1445524_27	eggNOG-mapper	1123288.SOV_2c10720	NA	NA
UHGV-1445524_27	Pfam	PF21822	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
UHGV-1445524_27	Structural annotation	PF21822	NA	NA
UHGV-1445524_28	PHROG	phrog_4364	NA	unknown function
UHGV-1445524_28	UniRef90	UniRef90_UPI001C39E5BE	4-alpha-glucanotransferase	NA
UHGV-1445524_28	eggNOG-mapper	1123288.SOV_2c10730	NA	NA
UHGV-1445524_29	PHROG	phrog_9570	tail length tape measure protein	tail
UHGV-1445524_29	UniRef90	UniRef90_A0A1Q6RAF2	Phage_lysozyme2 domain-containing protein	NA
UHGV-1445524_29	eggNOG-mapper	1123288.SOV_2c10740	NA	NA
UHGV-1445524_29	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1445524_29	Structural annotation	PF18013, COG4764	NA	NA
UHGV-1445524_30	PHROG	phrog_817	tail fiber protein	tail
UHGV-1445524_30	UniRef90	UniRef90_UPI0018EE58A4	fibronectin type III domain-containing protein	NA
UHGV-1445524_30	eggNOG-mapper	1123288.SOV_2c10750	NA	NA
UHGV-1445524_30	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-1445524_30	Structural annotation	PF21821, TIGR01633, COG4722	NA	NA
UHGV-1445524_31	PHROG	phrog_349	virion structural protein	head and packaging
UHGV-1445524_31	UniRef90	UniRef90_C5AFV8	Putative bacteriophage protein	NA
UHGV-1445524_31	eggNOG-mapper	936573.HMPREF1147_1342	NA	NA
UHGV-1445524_32	PHROG	phrog_196	virion structural protein	head and packaging
UHGV-1445524_32	UniRef90	UniRef90_A0A0U1KW78	NA	NA
UHGV-1445524_32	eggNOG-mapper	1123288.SOV_2c10770	NA	NA
UHGV-1445524_32	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-1445524_33	UniRef90	UniRef90_A0A1Q6RAF4	Gp138_N domain-containing protein	NA
UHGV-1445524_33	eggNOG-mapper	1415774.U728_3735	Baseplate assembly protein	NA
UHGV-1445524_33	Pfam	PF18352	NA	Gp138_N
UHGV-1445524_33	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-1445524_33	Structural annotation	PF18352, TIGR01644, COG4540	NA	NA
UHGV-1445524_34	PHROG	phrog_281	PAAR motif of membran proteins	moron, auxiliary metabolic gene and host takeover
UHGV-1445524_34	UniRef90	UniRef90_A0A1Q6RAC4	PaaR repeat-containing protein	NA
UHGV-1445524_34	eggNOG-mapper	927704.SELR_16680	PAAR repeat-containing protein	NA
UHGV-1445524_34	Pfam	PF05488	PAAR motif	PAAR_motif
UHGV-1445524_34	COG	COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	NA
UHGV-1445524_34	Structural annotation	PF05488, NF033420, COG4104	NA	NA
UHGV-1445524_35	PHROG	phrog_120	baseplate protein	tail
UHGV-1445524_35	UniRef90	UniRef90_A0A0U1KW63	Putative bacteriophage protein	NA
UHGV-1445524_35	eggNOG-mapper	1123288.SOV_2c10790	NA	NA
UHGV-1445524_35	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-1445524_36	PHROG	phrog_6	baseplate protein	tail
UHGV-1445524_36	UniRef90	UniRef90_A0A1Q6RAC9	Baseplate_J domain-containing protein	NA
UHGV-1445524_36	eggNOG-mapper	1123288.SOV_2c10800	Baseplate J-like protein	NA
UHGV-1445524_36	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1445524_36	COG	COG3299	NA	NA
UHGV-1445524_36	Structural annotation	PF04865, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-1445524_37	PHROG	phrog_587	structural protein	head and packaging
UHGV-1445524_37	UniRef90	UniRef90_UPI000CF9BD62	NA	NA
UHGV-1445524_37	eggNOG-mapper	1437882.AZRU01000124_gene4922	NA	NA
UHGV-1445524_37	Pfam	PF11041	NA	DUF2612
UHGV-1445524_37	Structural annotation	PF11041	NA	NA
UHGV-1445524_38	PHROG	phrog_5717	tail protein	tail
UHGV-1445524_38	eggNOG-mapper	1123288.SOV_2c10820	Phage Tail Collar Domain	NA
UHGV-1445524_38	COG	COG4675	Phage tail collar domain	NA
UHGV-1445524_38	Structural annotation	COG4675	NA	NA
UHGV-1445524_39	PHROG	phrog_21765	NA	unknown function
UHGV-1445524_41	PHROG	phrog_1084	NA	unknown function
UHGV-1445524_41	eggNOG-mapper	568816.Acin_1324	NA	NA
UHGV-1445524_41	Structural annotation	PF16407, NF032891, COG5456	NA	NA
UHGV-1445524_42	PHROG	phrog_31538	NA	unknown function
UHGV-1445524_42	eggNOG-mapper	428125.CLOLEP_01433	NA	NA