UHGV-1450280

Genome information

vOTU vOTU-020110

Genome length 27,022 bps

CDS count 38

Completeness 67.79% (medium-quality)

geNomad score 0.9765

Prediction confidence Confident

Genome information
Genome ID	UHGV-1450280
vOTU ID	vOTU-020110
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0194609
BioSample	NA
Country	Russia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.79% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9765
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	64.28
Jumbo phage	No

Genome content
Genome length	27,022 bps
GC content	38.04%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	38
CDS density	91.22%
Average CDS length	651.63 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1450280_1	eggNOG-mapper	1158601.I585_00724	NA	NA
UHGV-1450280_3	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1450280_3	UniRef90	UniRef90_UPI001A8D427A	recombinase RecT	NA
UHGV-1450280_3	eggNOG-mapper	537013.CLOSTMETH_01715	NA	NA
UHGV-1450280_3	Structural annotation	NF007351, COG3723	NA	NA
UHGV-1450280_4	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1450280_4	UniRef90	UniRef90_UPI00159E8E7B	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-1450280_4	eggNOG-mapper	945021.TEH_08380	NA	NA
UHGV-1450280_4	Pfam	PF12684	NA	DUF3799
UHGV-1450280_4	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-1450280_4	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-1450280_5	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1450280_5	UniRef90	UniRef90_UPI001C126A48	NA	NA
UHGV-1450280_5	eggNOG-mapper	226185.EF_2130	NA	NA
UHGV-1450280_5	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1450280_5	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-1450280_5	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-1450280_5	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1450280_5	Structural annotation	PF14297, PF07261, TIGR01446, COG3935	NA	NA
UHGV-1450280_6	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1450280_6	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1450280_6	UniRef90	UniRef90_UPI0010F6C39D	ATP-binding protein	NA
UHGV-1450280_6	eggNOG-mapper	226185.EF_2838	IstB-like ATP binding protein	NA
UHGV-1450280_6	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1450280_6	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1450280_6	Structural annotation	PF01695, MF_00377, NF005931, COG1484	NA	NA
UHGV-1450280_7	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1450280_7	UniRef90	UniRef90_A0A437UPN5	NA	NA
UHGV-1450280_7	eggNOG-mapper	1158602.I590_02960	NA	NA
UHGV-1450280_7	Pfam	PF06356	NA	DUF1064
UHGV-1450280_8	eggNOG-mapper	1158601.I585_01175	NA	NA
UHGV-1450280_9	PHROG	phrog_10711	NA	unknown function
UHGV-1450280_9	eggNOG-mapper	768486.EHR_09515	NA	NA
UHGV-1450280_12	PHROG	phrog_98	NA	unknown function
UHGV-1450280_12	UniRef90	UniRef90_UPI000F4F790C	YopX family protein	NA
UHGV-1450280_12	eggNOG-mapper	673835.D2IZE6_9CAUD	YopX protein	NA
UHGV-1450280_12	Pfam	PF09643	YopX protein	YopX
UHGV-1450280_12	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1450280_12	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1450280_14	PHROG	phrog_28321	NA	unknown function
UHGV-1450280_17	PHROG	phrog_121	NA	unknown function
UHGV-1450280_17	UniRef90	UniRef90_UPI000CAF5A8D	NA	NA
UHGV-1450280_17	eggNOG-mapper	1458856.A0A059T7S4_9CAUD	NA	NA
UHGV-1450280_17	Pfam	PF07852	NA	DUF1642
UHGV-1450280_18	PHROG	phrog_98	NA	unknown function
UHGV-1450280_18	UniRef90	UniRef90_UPI001EDCB6DF	YopX family protein	NA
UHGV-1450280_18	eggNOG-mapper	1201292.DR75_1526	YopX protein	NA
UHGV-1450280_18	Pfam	PF09643	YopX protein	YopX
UHGV-1450280_18	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1450280_18	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1450280_19	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-1450280_19	UniRef90	UniRef90_A0A7U6L5H0	Autolysin	NA
UHGV-1450280_19	eggNOG-mapper	1158602.I590_02984	NA	NA
UHGV-1450280_19	NCBIFam	TIGR01637.1	ArpU family phage packaging/lysis transcriptional regulator	NA
UHGV-1450280_19	Structural annotation	PF05263, MF_00674, TIGR01637, COG1191	NA	NA
UHGV-1450280_21	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-1450280_21	UniRef90	UniRef90_UPI00196B2C2C	phage terminase small subunit	NA
UHGV-1450280_21	eggNOG-mapper	1158614.I592_01116	DNA packaging	NA
UHGV-1450280_21	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-1450280_21	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-1450280_21	COG	COG5484	NA	NA
UHGV-1450280_21	Structural annotation	NF040601, COG5484	NA	NA
UHGV-1450280_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1450280_22	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1450280_22	UniRef90	UniRef90_A0A345FQI9	PBSX family phage terminase large subunit	NA
UHGV-1450280_22	eggNOG-mapper	1140001.I571_02105	Terminase RNAseH like domain	NA
UHGV-1450280_22	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1450280_22	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1450280_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1450280_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-1450280_22	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1450280_23	PHROG	phrog_533	portal protein	head and packaging
UHGV-1450280_23	UniRef90	UniRef90_A0A3F3LAK1	Phage portal protein	NA
UHGV-1450280_23	eggNOG-mapper	1140001.I571_02106	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1450280_23	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1450280_23	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-1450280_23	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1450280_24	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1450280_24	UniRef90	UniRef90_S4EI20	Phage minor capsid protein 2	NA
UHGV-1450280_24	eggNOG-mapper	1158614.I592_01119	Phage minor capsid protein 2	NA
UHGV-1450280_24	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1450280_24	Structural annotation	PF06152	NA	NA
UHGV-1450280_25	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1450280_25	UniRef90	UniRef90_S4E2G7	Phage minor structural protein GP20	NA
UHGV-1450280_25	eggNOG-mapper	1140001.I571_02108	Phage minor structural protein GP20	NA
UHGV-1450280_25	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1450280_25	Structural annotation	PF06810	NA	NA
UHGV-1450280_26	PHROG	phrog_422	major head protein	head and packaging
UHGV-1450280_26	UniRef90	UniRef90_A0A829A4D2	BIG2 domain-containing protein	NA
UHGV-1450280_26	eggNOG-mapper	1158614.I592_01121	NA	NA
UHGV-1450280_26	Structural annotation	PF20911	NA	NA
UHGV-1450280_27	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1450280_27	eggNOG-mapper	1158614.I592_01122	NA	NA
UHGV-1450280_28	PHROG	phrog_793	head-tail adaptor	connector
UHGV-1450280_28	UniRef90	UniRef90_UPI00090013CF	putative minor capsid protein	NA
UHGV-1450280_28	eggNOG-mapper	1158601.I585_00693	Minor capsid protein	NA
UHGV-1450280_28	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-1450280_28	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1450280_29	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1450280_29	UniRef90	UniRef90_A0A345FQJ7	Capsid protein	NA
UHGV-1450280_29	eggNOG-mapper	1158601.I585_00692	Minor capsid protein	NA
UHGV-1450280_29	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1450280_29	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-1450280_30	PHROG	phrog_913	minor head protein	head and packaging
UHGV-1450280_30	UniRef90	UniRef90_UPI0018A2E21A	capsid protein	NA
UHGV-1450280_30	eggNOG-mapper	1140001.I571_02114	Minor capsid protein from bacteriophage	NA
UHGV-1450280_30	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1450280_30	Structural annotation	PF12691	NA	NA
UHGV-1450280_31	PHROG	phrog_820	major tail protein	tail
UHGV-1450280_31	UniRef90	UniRef90_UPI001C11E232	capsid protein	NA
UHGV-1450280_31	eggNOG-mapper	1140001.I571_02115	domain, Protein	NA
UHGV-1450280_31	COG	COG5492	NA	NA
UHGV-1450280_31	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1450280_32	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-1450280_32	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-1450280_32	UniRef90	UniRef90_A0A437UPB3	Ig domain-containing protein	NA
UHGV-1450280_32	eggNOG-mapper	1140001.I571_02116	domain, Protein	NA
UHGV-1450280_32	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-1450280_32	COG	COG5492	NA	NA
UHGV-1450280_32	Structural annotation	PF02368	NA	NA
UHGV-1450280_33	PHROG	phrog_10257	minor head protein	head and packaging
UHGV-1450280_33	UniRef90	UniRef90_C9AN01	Predicted protein	NA
UHGV-1450280_33	eggNOG-mapper	1140001.I571_02117	NA	NA
UHGV-1450280_33	Structural annotation	PF10666	NA	NA
UHGV-1450280_34	PHROG	phrog_706	NA	unknown function
UHGV-1450280_34	UniRef90	UniRef90_UPI001C10E1BA	Gp15 family bacteriophage protein	NA
UHGV-1450280_34	eggNOG-mapper	1140001.I571_02118	Bacteriophage Gp15 protein	NA
UHGV-1450280_34	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1450280_34	Structural annotation	PF06854	NA	NA
UHGV-1450280_35	PHROG	phrog_167	tail length tape measure protein	tail
UHGV-1450280_35	UniRef90	UniRef90_A0A345FQK3	Capsid protein	NA
UHGV-1450280_35	eggNOG-mapper	1158601.I585_00686	NlpC/P60 family	NA
UHGV-1450280_35	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1450280_35	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1450280_35	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1450280_35	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-1450280_35	Structural annotation	PF20155, PF18013, TIGR01760, COG3941, COG3953	NA	NA
UHGV-1450280_36	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1450280_36	UniRef90	UniRef90_A0A437UPA9	Phage tail family protein	NA
UHGV-1450280_36	eggNOG-mapper	1158614.I592_01131	Phage tail protein	NA
UHGV-1450280_36	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1450280_36	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-1450280_37	PHROG	phrog_326	tail protein with endopeptidase domain	other
UHGV-1450280_37	UniRef90	UniRef90_UPI00090032DF	phage tail protein	NA
UHGV-1450280_37	eggNOG-mapper	1158601.I585_00684	Prophage endopeptidase tail	NA
UHGV-1450280_37	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-1450280_37	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1450280_37	COG	COG4926	Phage-related protein	NA
UHGV-1450280_37	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-1450280_38	PHROG	phrog_4577	tail protein	tail
UHGV-1450280_38	eggNOG-mapper	1158614.I592_00634	NA	NA