UHGV-1451311

Genome information

vOTU vOTU-019022

Genome length 38,662 bps

CDS count 48

Completeness 87.59% (medium-quality)

geNomad score 0.9756

Prediction confidence Confident

Genome information
Genome ID	UHGV-1451311
vOTU ID	vOTU-019022
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0261198
BioSample	SAMEA2738139
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.59% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	29
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9756
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	65.91
Jumbo phage	No

Genome content
Genome length	38,662 bps
GC content	46.74%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	48
CDS density	91.50%
Average CDS length	738.63 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1451311_1	eggNOG-mapper	864563.HMPREF9166_1014	DNA integration	NA
UHGV-1451311_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1451311_2	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1451311_2	UniRef90	UniRef90_UPI0006B5777C	helix-turn-helix domain-containing protein	NA
UHGV-1451311_2	eggNOG-mapper	1128398.Curi_c22140	Helix-turn-helix XRE-family like proteins	NA
UHGV-1451311_2	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-1451311_2	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1451311_2	Structural annotation	PF12844, MF_02017, NF007257, COG1476	NA	NA
UHGV-1451311_6	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1451311_6	UniRef90	UniRef90_A0A1I0VIS6	Putative phage-type endonuclease	NA
UHGV-1451311_6	eggNOG-mapper	1280706.AUJE01000003_gene2280	YqaJ viral recombinase family protein	NA
UHGV-1451311_6	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-1451311_6	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-1451311_6	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-1451311_6	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-1451311_7	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1451311_7	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1451311_7	UniRef90	UniRef90_UPI00042A6426	recombinase RecT	NA
UHGV-1451311_7	eggNOG-mapper	1280706.AUJE01000003_gene2279	Recombinase, phage RecT family	NA
UHGV-1451311_7	Pfam	PF03837	RecT family	RecT
UHGV-1451311_7	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1451311_7	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1451311_7	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-1451311_8	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-1451311_8	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1451311_8	UniRef90	UniRef90_UPI001D022FF4	DnaD domain protein	NA
UHGV-1451311_8	eggNOG-mapper	1123250.KB908417_gene658	Replication initiation and membrane attachment	NA
UHGV-1451311_8	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-1451311_8	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-1451311_8	Structural annotation	PF09681, TIGR01446, NF033788, COG3935	NA	NA
UHGV-1451311_9	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1451311_9	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1451311_9	UniRef90	UniRef90_A0A412KTU3	IstB_IS21 domain-containing protein	NA
UHGV-1451311_9	eggNOG-mapper	1123250.KB908417_gene657	DNA-dependent DNA replication	NA
UHGV-1451311_9	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1451311_9	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1451311_9	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-1451311_10	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1451311_10	UniRef90	UniRef90_A0A841R0Q1	Holliday junction resolvase	NA
UHGV-1451311_10	eggNOG-mapper	1123250.KB908417_gene653	NA	NA
UHGV-1451311_10	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-1451311_11	PHROG	phrog_2977	anti-repressor	transcription regulation
UHGV-1451311_11	UniRef90	UniRef90_A0A7X7VRE5	Bro-N domain-containing protein (Fragment)	NA
UHGV-1451311_11	eggNOG-mapper	1304866.K413DRAFT_4750	Phage antirepressor protein	NA
UHGV-1451311_11	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1451311_11	COG	COG3617	Prophage antirepressor	NA
UHGV-1451311_11	Structural annotation	PF02498, TIGR02681, COG3617	NA	NA
UHGV-1451311_12	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1451311_12	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-1451311_12	UniRef90	UniRef90_UPI001D012263	phage antirepressor	NA
UHGV-1451311_12	eggNOG-mapper	573061.Clocel_3580	Phage antirepressor protein	NA
UHGV-1451311_12	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1451311_12	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1451311_12	COG	COG3617	Prophage antirepressor	NA
UHGV-1451311_12	Structural annotation	PF03374, PF02498, TIGR02681, COG3617, COG3645	NA	NA
UHGV-1451311_13	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-1451311_13	PHROG	phrog_56	DNA methyltransferase	other
UHGV-1451311_13	UniRef90	UniRef90_A0A7V6GWJ7	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-1451311_13	eggNOG-mapper	546271.Selsp_0625	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-1451311_13	PADLOC	oMTase_00024	orphan methyltransferase	RM
UHGV-1451311_13	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-1451311_13	NCBIFam	TIGR00571.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA
UHGV-1451311_13	COG	COG0338	DNA-adenine methylase	NA
UHGV-1451311_15	eggNOG-mapper	247490.KSU1_C1079	NA	NA
UHGV-1451311_16	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1451311_16	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1451311_16	UniRef90	UniRef90_H6LCF9	Single-stranded DNA-binding protein	NA
UHGV-1451311_16	eggNOG-mapper	931626.Awo_c35500	Single-stranded DNA-binding protein	NA
UHGV-1451311_16	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1451311_16	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1451311_16	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1451311_16	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1451311_16	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1451311_17	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1451311_17	eggNOG-mapper	1200557.JHWV01000006_gene1739	NA	NA
UHGV-1451311_17	Structural annotation	PF08281, NF008895, COG1595	NA	NA
UHGV-1451311_18	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-1451311_18	PHROG	phrog_498	DNA methyltransferase	other
UHGV-1451311_18	UniRef90	UniRef90_A0A416BKC5	ParB domain-containing protein	NA
UHGV-1451311_18	eggNOG-mapper	1123288.SOV_2c03720	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-1451311_18	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1451311_18	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1451311_18	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1451311_18	COG	COG0863	DNA modification methylase	NA
UHGV-1451311_18	Structural annotation	PF01555, PF02195, MF_02015, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-1451311_19	PHROG	phrog_6299	terminase small subunit	head and packaging
UHGV-1451311_19	eggNOG-mapper	1329516.JPST01000018_gene2641	NA	NA
UHGV-1451311_19	Structural annotation	PF10668	NA	NA
UHGV-1451311_20	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1451311_20	PHROG	phrog_10250	NA	unknown function
UHGV-1451311_20	UniRef90	UniRef90_C9LU77	Phage terminase, large subunit, PBSX family	NA
UHGV-1451311_20	eggNOG-mapper	936573.HMPREF1147_1322	Phage terminase, large subunit, PBSX family	NA
UHGV-1451311_20	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1451311_20	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1451311_20	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1451311_20	COG	COG1783	Phage terminase large subunit	NA
UHGV-1451311_20	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1451311_21	KOfam	K09961	NA	NA
UHGV-1451311_21	PHROG	phrog_146	portal protein	head and packaging
UHGV-1451311_21	UniRef90	UniRef90_J5I3B7	Phage-associated protein, HI1409 family	NA
UHGV-1451311_21	eggNOG-mapper	936573.HMPREF1147_1323	NA	NA
UHGV-1451311_21	Pfam	PF06381	Anti-CBASS protein Acb1-like	Abc1-like
UHGV-1451311_21	NCBIFam	TIGR01555.1	phage-associated protein, HI1409 family	NA
UHGV-1451311_21	COG	COG3567	NA	NA
UHGV-1451311_21	Structural annotation	PF06381, MF_04135, TIGR01555, COG3567	NA	NA
UHGV-1451311_22	PHROG	phrog_324	head morphogenesis	head and packaging
UHGV-1451311_22	UniRef90	UniRef90_J4TYK5	Phage protein F-like protein	NA
UHGV-1451311_22	eggNOG-mapper	936573.HMPREF1147_1326	Phage Mu protein F like protein	NA
UHGV-1451311_22	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1451311_22	COG	COG2369	NA	NA
UHGV-1451311_22	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-1451311_23	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-1451311_25	KOfam	K09960	NA	NA
UHGV-1451311_25	PHROG	phrog_16985	NA	unknown function
UHGV-1451311_25	UniRef90	UniRef90_J5I3K2	PF09979 family protein	NA
UHGV-1451311_25	eggNOG-mapper	546271.Selsp_1333	NA	NA
UHGV-1451311_25	Pfam	PF09979	NA	DUF2213
UHGV-1451311_25	COG	COG3566	NA	NA
UHGV-1451311_25	Structural annotation	PF09979, TIGR01543, COG3566	NA	NA
UHGV-1451311_26	PHROG	phrog_563	virion structural protein	head and packaging
UHGV-1451311_26	eggNOG-mapper	936573.HMPREF1147_1329	NA	NA
UHGV-1451311_26	Structural annotation	PF09956	NA	NA
UHGV-1451311_27	PHROG	phrog_264	major head protein	head and packaging
UHGV-1451311_27	UniRef90	UniRef90_UPI001C39DBF5	NA	NA
UHGV-1451311_27	eggNOG-mapper	936573.HMPREF1147_1330	NA	NA
UHGV-1451311_27	Pfam	PF09950	NA	DUF2184
UHGV-1451311_27	COG	COG4834	NA	NA
UHGV-1451311_27	Structural annotation	PF09950, MF_04113, TIGR01554, COG4834	NA	NA
UHGV-1451311_29	PHROG	phrog_302	virion structural protein	head and packaging
UHGV-1451311_29	UniRef90	UniRef90_UPI001C3A0860	NA	NA
UHGV-1451311_29	eggNOG-mapper	864563.HMPREF9166_1250	NA	NA
UHGV-1451311_29	Pfam	PF13262	NA	DUF4054
UHGV-1451311_29	Structural annotation	PF13262	NA	NA
UHGV-1451311_30	PHROG	phrog_222	tail protein	tail
UHGV-1451311_30	UniRef90	UniRef90_C9LU87	Putative bacteriophage protein	NA
UHGV-1451311_30	eggNOG-mapper	864563.HMPREF9166_1249	NA	NA
UHGV-1451311_31	PHROG	phrog_939	head protein	head and packaging
UHGV-1451311_31	eggNOG-mapper	936573.HMPREF1147_1334	NA	NA
UHGV-1451311_31	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1451311_32	PHROG	phrog_1973	NA	unknown function
UHGV-1451311_32	UniRef90	UniRef90_R6AF52	Putative aldehyde dehydrogenase	NA
UHGV-1451311_32	eggNOG-mapper	864563.HMPREF9166_1247	NA	NA
UHGV-1451311_32	Structural annotation	PF09646	NA	NA
UHGV-1451311_33	PHROG	phrog_205	virion structural protein	head and packaging
UHGV-1451311_33	UniRef90	UniRef90_UPI00069CE679	NA	NA
UHGV-1451311_33	eggNOG-mapper	546271.Selsp_1325	NA	NA
UHGV-1451311_33	Pfam	PF11863	NA	DUF3383
UHGV-1451311_33	Structural annotation	PF11863, COG4386	NA	NA
UHGV-1451311_34	PHROG	phrog_280	virion structural protein	head and packaging
UHGV-1451311_34	UniRef90	UniRef90_J4TYN4	PF11681 family protein	NA
UHGV-1451311_34	eggNOG-mapper	936573.HMPREF1147_1337	NA	NA
UHGV-1451311_34	Pfam	PF11681	Bacteriophage KPP10, Structural protein ORF10	KPP10_Orf10
UHGV-1451311_34	Structural annotation	PF11681, TIGR02241, COG5437	NA	NA
UHGV-1451311_35	PHROG	phrog_1688	tail assembly chaperone	tail
UHGV-1451311_35	eggNOG-mapper	546271.Selsp_1323	NA	NA
UHGV-1451311_35	Pfam	PF21822	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
UHGV-1451311_35	Structural annotation	PF21822	NA	NA
UHGV-1451311_36	PHROG	phrog_22539	NA	unknown function
UHGV-1451311_36	UniRef90	UniRef90_C9LU94	Phage_lysozyme2 domain-containing protein	NA
UHGV-1451311_36	eggNOG-mapper	546271.Selsp_1322	NA	NA
UHGV-1451311_36	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1451311_36	Structural annotation	PF18013, NF011856	NA	NA
UHGV-1451311_37	PHROG	phrog_817	tail fiber protein	tail
UHGV-1451311_37	eggNOG-mapper	936573.HMPREF1147_1341	NA	NA
UHGV-1451311_37	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-1451311_37	Structural annotation	PF21821, TIGR01633, COG3499	NA	NA
UHGV-1451311_38	PHROG	phrog_349	virion structural protein	head and packaging
UHGV-1451311_38	eggNOG-mapper	936573.HMPREF1147_1342	NA	NA
UHGV-1451311_39	PHROG	phrog_20677	NA	unknown function
UHGV-1451311_39	eggNOG-mapper	546271.Selsp_1319	NA	NA
UHGV-1451311_39	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-1451311_40	UniRef90	UniRef90_C9LU98	Gp138_N domain-containing protein	NA
UHGV-1451311_40	eggNOG-mapper	546271.Selsp_1318	Baseplate assembly protein	NA
UHGV-1451311_40	Pfam	PF18352	NA	Gp138_N
UHGV-1451311_40	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-1451311_40	Structural annotation	PF18352, MF_01345_A, TIGR01644, COG4540	NA	NA
UHGV-1451311_41	PHROG	phrog_281	PAAR motif of membran proteins	moron, auxiliary metabolic gene and host takeover
UHGV-1451311_41	UniRef90	UniRef90_UPI000420570C	PAAR domain-containing protein	NA
UHGV-1451311_41	eggNOG-mapper	927704.SELR_16680	PAAR repeat-containing protein	NA
UHGV-1451311_41	Pfam	PF05488	PAAR motif	PAAR_motif
UHGV-1451311_41	COG	COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	NA
UHGV-1451311_41	Structural annotation	PF05488, NF033420, COG4104	NA	NA
UHGV-1451311_42	PHROG	phrog_120	baseplate protein	tail
UHGV-1451311_42	eggNOG-mapper	864563.HMPREF9166_1237	NA	NA
UHGV-1451311_42	Structural annotation	TIGR03357, COG3628	NA	NA
UHGV-1451311_43	PHROG	phrog_6	baseplate protein	tail
UHGV-1451311_43	UniRef90	UniRef90_E0NZG9	Baseplate_J domain-containing protein	NA
UHGV-1451311_43	eggNOG-mapper	864563.HMPREF9166_1236	homolog of phage Mu protein gp47	NA
UHGV-1451311_43	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1451311_43	COG	COG3299	NA	NA
UHGV-1451311_43	Structural annotation	PF03434, PF21379, PF21110, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-1451311_44	PHROG	phrog_587	structural protein	head and packaging
UHGV-1451311_44	UniRef90	UniRef90_J5I3C5	PF11041 domain protein	NA
UHGV-1451311_44	eggNOG-mapper	936573.HMPREF1147_1347	NA	NA
UHGV-1451311_44	Pfam	PF11041	NA	DUF2612
UHGV-1451311_44	Structural annotation	PF11041, TIGR02242, COG3948	NA	NA
UHGV-1451311_45	PHROG	phrog_6465	tail protein	tail
UHGV-1451311_45	UniRef90	UniRef90_A0A173RZM4	Phage-related holin (Lysis protein)	NA
UHGV-1451311_45	eggNOG-mapper	1273103.NM10_00989	tail collar domain protein	NA
UHGV-1451311_45	COG	COG4675	Phage tail collar domain	NA
UHGV-1451311_45	Structural annotation	PF12571	NA	NA
UHGV-1451311_46	PHROG	phrog_6465	tail protein	tail
UHGV-1451311_46	UniRef90	UniRef90_UPI001CD684CA	phage tail protein	NA
UHGV-1451311_46	eggNOG-mapper	1042156.CXIVA_07170	tail collar domain protein	NA
UHGV-1451311_46	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-1451311_46	COG	COG4675	Phage tail collar domain	NA
UHGV-1451311_46	Structural annotation	PF12571, MF_04106, COG5301	NA	NA
UHGV-1451311_48	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-1451311_48	UniRef90	UniRef90_UPI001C2083E3	SGNH/GDSL hydrolase family protein	NA
UHGV-1451311_48	eggNOG-mapper	1267535.KB906767_gene4788	GDSL-like Lipase/Acylhydrolase	NA
UHGV-1451311_48	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-1451311_48	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA