UHGV-1451637

Genome information

vOTU vOTU-019297

Genome length 24,764 bps

CDS count 29

Completeness 53.56% (medium-quality)

geNomad score 0.9691

Prediction confidence Confident

Genome information
Genome ID	UHGV-1451637
vOTU ID	vOTU-019297
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0180678
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.56% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9691
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	50.1
Jumbo phage	No

Genome content
Genome length	24,764 bps
GC content	44.96%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	29
CDS density	94.18%
Average CDS length	806.59 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1451637_1	PHROG	phrog_11237	NA	unknown function
UHGV-1451637_1	eggNOG-mapper	610130.Closa_0738	NA	NA
UHGV-1451637_2	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-1451637_2	UniRef90	UniRef90_UPI00164E8CA3	transposase	NA
UHGV-1451637_2	eggNOG-mapper	1408437.JNJN01000045_gene597	HNH endonuclease	NA
UHGV-1451637_2	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-1451637_2	Structural annotation	PF07141	NA	NA
UHGV-1451637_3	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-1451637_3	UniRef90	UniRef90_A0A8H9QRT1	Phage terminase large subunit	NA
UHGV-1451637_3	eggNOG-mapper	1280692.AUJL01000025_gene2084	TIGRFAM Phage	NA
UHGV-1451637_3	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-1451637_3	COG	COG5410	NA	NA
UHGV-1451637_3	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-1451637_4	PHROG	phrog_64	portal protein	head and packaging
UHGV-1451637_4	UniRef90	UniRef90_A0A259V0A1	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1451637_4	eggNOG-mapper	1121289.JHVL01000082_gene1210	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1451637_4	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1451637_4	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-1451637_5	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1451637_5	UniRef90	UniRef90_UPI001F1A3EF7	minor capsid protein	NA
UHGV-1451637_5	eggNOG-mapper	1321779.HMPREF1984_01309	Phage Mu protein F like protein	NA
UHGV-1451637_5	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1451637_5	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1451637_5	COG	COG2369	NA	NA
UHGV-1451637_6	eggNOG-mapper	1304866.K413DRAFT_0808	NA	NA
UHGV-1451637_7	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1451637_7	UniRef90	UniRef90_A0A410Q086	Phage scaffold protein	NA
UHGV-1451637_7	eggNOG-mapper	1196028.ALEF01000043_gene465	Phage minor structural protein GP20	NA
UHGV-1451637_7	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1451637_7	Structural annotation	PF06810	NA	NA
UHGV-1451637_8	PHROG	phrog_909	major head protein	head and packaging
UHGV-1451637_8	eggNOG-mapper	1497679.EP56_02915	NA	NA
UHGV-1451637_9	PHROG	phrog_29	major head protein	head and packaging
UHGV-1451637_9	UniRef90	UniRef90_A0A2K9P3U0	Phage major capsid protein E	NA
UHGV-1451637_9	eggNOG-mapper	1232443.BAIA02000078_gene29	Phage major capsid protein E	NA
UHGV-1451637_9	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-1451637_9	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-1451637_10	PHROG	phrog_132	head-tail adaptor	connector
UHGV-1451637_10	eggNOG-mapper	861454.HMPREF9099_00611	NA	NA
UHGV-1451637_10	Structural annotation	PF05135	NA	NA
UHGV-1451637_11	PHROG	phrog_615	head-tail adaptor	connector
UHGV-1451637_11	UniRef90	UniRef90_UPI000ACDB421	ABC transporter ATP-binding protein	NA
UHGV-1451637_11	eggNOG-mapper	742740.HMPREF9474_02351	NA	NA
UHGV-1451637_11	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-1451637_12	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1451637_12	UniRef90	UniRef90_A0A4R1PUJ9	Bacteriophage HK97-gp10 putative tail-component	NA
UHGV-1451637_12	eggNOG-mapper	742740.HMPREF9474_02350	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1451637_12	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1451637_12	Structural annotation	PF04883, TIGR01725, COG5005	NA	NA
UHGV-1451637_13	PHROG	phrog_525	NA	unknown function
UHGV-1451637_13	UniRef90	UniRef90_A0A0D3VCS5	NA	NA
UHGV-1451637_13	eggNOG-mapper	1536772.R70723_06695	NA	NA
UHGV-1451637_13	Pfam	PF20765	NA	DUF6838
UHGV-1451637_13	Structural annotation	PF20765, COG5003	NA	NA
UHGV-1451637_14	PHROG	phrog_966	NA	unknown function
UHGV-1451637_14	eggNOG-mapper	397288.C806_00127	NA	NA
UHGV-1451637_15	PHROG	phrog_279	tail sheath	tail
UHGV-1451637_15	UniRef90	UniRef90_A0A7C8LSZ4	Phage tail protein	NA
UHGV-1451637_15	eggNOG-mapper	742740.HMPREF9474_02347	Phage tail sheath C-terminal domain	NA
UHGV-1451637_15	Pfam	PF17481	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
UHGV-1451637_15	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-1451637_15	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-1451637_15	Structural annotation	PF17482, PF04984, PF17481, COG4386	NA	NA
UHGV-1451637_16	PHROG	phrog_365	tail protein	tail
UHGV-1451637_16	UniRef90	UniRef90_UPI0018AB5726	phage tail tube protein	NA
UHGV-1451637_16	eggNOG-mapper	642492.Clole_2749	Phage tail tube protein	NA
UHGV-1451637_16	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-1451637_16	Structural annotation	PF09393, TIGR02241, COG5437	NA	NA
UHGV-1451637_17	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-1451637_17	UniRef90	UniRef90_S0FG63	Phage XkdN-like protein	NA
UHGV-1451637_17	eggNOG-mapper	1195236.CTER_3995	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-1451637_17	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-1451637_17	Structural annotation	PF08890, COG4518	NA	NA
UHGV-1451637_18	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-1451637_18	UniRef90	UniRef90_A0A1Q6LSE2	TMP_3 domain-containing protein	NA
UHGV-1451637_18	eggNOG-mapper	357809.Cphy_2955	tape measure	NA
UHGV-1451637_18	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1451637_18	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1451637_18	COG	COG5281	Phage-related minor tail protein	NA
UHGV-1451637_18	Structural annotation	PF20155, COG3941	NA	NA
UHGV-1451637_19	PHROG	phrog_380	endolysin	lysis
UHGV-1451637_19	UniRef90	UniRef90_A0A2K9P3V0	Peptidoglycan-binding LysM	NA
UHGV-1451637_19	eggNOG-mapper	1151292.QEW_1349	LysM domain	NA
UHGV-1451637_19	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-1451637_20	PHROG	phrog_400	tail protein	tail
UHGV-1451637_20	UniRef90	UniRef90_A0A316PG95	Amidase_5 domain-containing protein	NA
UHGV-1451637_20	eggNOG-mapper	1029718.SFBM_0133	PFAM Phage late control gene D protein (GPD)	NA
UHGV-1451637_20	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-1451637_20	Structural annotation	PF14594, NF033848, NF033742, COG4379	NA	NA
UHGV-1451637_21	PHROG	phrog_579	NA	unknown function
UHGV-1451637_21	UniRef90	UniRef90_A0A316PDY3	Phage portal protein	NA
UHGV-1451637_21	eggNOG-mapper	1095750.HMPREF9970_0330	NA	NA
UHGV-1451637_21	Pfam	PF10844	NA	DUF2577
UHGV-1451637_21	Structural annotation	PF10844	NA	NA
UHGV-1451637_22	PHROG	phrog_120	baseplate protein	tail
UHGV-1451637_22	UniRef90	UniRef90_A0A316PHP4	NA	NA
UHGV-1451637_22	eggNOG-mapper	1226322.HMPREF1545_04036	NA	NA
UHGV-1451637_22	Pfam	PF10934	NA	DUF2634
UHGV-1451637_22	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-1451637_22	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-1451637_23	PHROG	phrog_6	baseplate protein	tail
UHGV-1451637_23	UniRef90	UniRef90_H2J8Z6	Putative phage Mu protein gp47-like protein	NA
UHGV-1451637_23	eggNOG-mapper	755731.Clo1100_3788	Baseplate J-like protein	NA
UHGV-1451637_23	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1451637_23	COG	COG3299	NA	NA
UHGV-1451637_23	Structural annotation	PF04865, PF21379, MF_04102, COG3299	NA	NA
UHGV-1451637_24	PHROG	phrog_521	tail protein	tail
UHGV-1451637_24	UniRef90	UniRef90_A0A858BX30	YmfQ family protein	NA
UHGV-1451637_24	eggNOG-mapper	1195236.CTER_3988	NA	NA
UHGV-1451637_24	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-1451637_24	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-1451637_24	Structural annotation	PF10076, TIGR02242, COG3778	NA	NA
UHGV-1451637_25	eggNOG-mapper	1380600.AUYN01000010_gene879	Hep Hag repeat protein	NA
UHGV-1451637_25	COG	COG5295	Autotransporter adhesin	NA
UHGV-1451637_26	PHROG	phrog_19111	NA	unknown function
UHGV-1451637_26	eggNOG-mapper	1297617.JPJD01000034_gene670	NA	NA
UHGV-1451637_26	Structural annotation	PF16756, MF_01195, TIGR03548, COG3055	NA	NA
UHGV-1451637_27	eggNOG-mapper	1297617.JPJD01000034_gene669	NA	NA
UHGV-1451637_28	PHROG	phrog_134	NA	unknown function
UHGV-1451637_28	UniRef90	UniRef90_A0A3E2WBQ5	XkdX family protein	NA
UHGV-1451637_28	eggNOG-mapper	1297617.JPJD01000099_gene2170	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-1451637_28	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1451637_28	NCBIFam	TIGR01669.1	XkdX family protein	NA
UHGV-1451637_28	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1451637_29	PHROG	phrog_16573	NA	unknown function
UHGV-1451637_29	eggNOG-mapper	411468.CLOSCI_01502	NA	NA
UHGV-1451637_29	Pfam	PF10651	BppU N-terminal domain	BppU_N