UHGV-1455832

Genome information

vOTU vOTU-020264

Genome length 44,043 bps

CDS count 59

Completeness 54.64% (medium-quality)

geNomad score 0.9796

Prediction confidence Confident

Genome information
Genome ID	UHGV-1455832
vOTU ID	vOTU-020264
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0288941
BioSample	NA
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.64% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9796
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.57
Jumbo phage	No

Genome content
Genome length	44,043 bps
GC content	37.80%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	59
CDS density	83.35%
Average CDS length	624.15 bps
tRNA count	4
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1455832_2	PHROG	phrog_6616	tail protein	tail
UHGV-1455832_2	UniRef90	UniRef90_R5QUN9	Peptidase S74 domain-containing protein	NA
UHGV-1455832_2	eggNOG-mapper	476272.RUMHYD_01992	NA	NA
UHGV-1455832_2	Structural annotation	PF05113, PF18957, PF16407, NF033848, NF011782, COG4379	NA	NA
UHGV-1455832_3	PHROG	phrog_1194	NA	unknown function
UHGV-1455832_3	eggNOG-mapper	1117108.PAALTS15_13512	NA	NA
UHGV-1455832_3	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1455832_5	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-1455832_5	UniRef90	UniRef90_UPI0015F8EBB1	ORF6C domain-containing protein	NA
UHGV-1455832_5	eggNOG-mapper	596315.HMPREF0634_0237	BRO family, N-terminal domain protein	NA
UHGV-1455832_5	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1455832_5	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-1455832_5	COG	COG3617	Prophage antirepressor	NA
UHGV-1455832_5	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-1455832_6	PHROG	phrog_3896	NA	unknown function
UHGV-1455832_6	eggNOG-mapper	397290.C810_01338	NA	NA
UHGV-1455832_7	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1455832_7	PHROG	phrog_5817	anti-repressor Ant	transcription regulation
UHGV-1455832_7	UniRef90	UniRef90_A0A373NQA0	Toxin Bro	NA
UHGV-1455832_7	eggNOG-mapper	476272.RUMHYD_01982	AntA/AntB antirepressor	NA
UHGV-1455832_7	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-1455832_7	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-1455832_7	Structural annotation	PF08346, TIGR02681, COG3561	NA	NA
UHGV-1455832_8	UniRef90	UniRef90_A0A416L831	Toxin-antitoxin system HicB family antitoxin	NA
UHGV-1455832_8	Structural annotation	PF16777, NF010256, COG4877	NA	NA
UHGV-1455832_9	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-1455832_9	UniRef90	UniRef90_A0A839JXV0	Ig domain-containing protein	NA
UHGV-1455832_9	eggNOG-mapper	1410624.JNKK01000014_gene1631	Bacterial Ig-like domain (group 2)	NA
UHGV-1455832_9	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-1455832_9	COG	COG2304	Secreted protein containing bacterial Ig-like domain and vWFA domain	NA
UHGV-1455832_9	Structural annotation	PF02368, PF07233, NF005261, COG5492	NA	NA
UHGV-1455832_11	eggNOG-mapper	1235793.C809_00537	NA	NA
UHGV-1455832_12	PHROG	phrog_21101	NA	unknown function
UHGV-1455832_12	UniRef90	UniRef90_A0A412EKK3	NA	NA
UHGV-1455832_12	eggNOG-mapper	877415.JNJQ01000017_gene246	Prolyl oligopeptidase family	NA
UHGV-1455832_12	Pfam	PF07866	NA	DUF1653
UHGV-1455832_12	COG	COG4099	Predicted peptidase	NA
UHGV-1455832_12	Structural annotation	PF07866, COG4728	NA	NA
UHGV-1455832_14	PHROG	phrog_2316	NA	unknown function
UHGV-1455832_14	UniRef90	UniRef90_A0A373NQV5	NA	NA
UHGV-1455832_14	eggNOG-mapper	1280698.AUJS01000007_gene1022	NA	NA
UHGV-1455832_14	Pfam	PF16475	NA	DUF5052
UHGV-1455832_14	Structural annotation	PF16475	NA	NA
UHGV-1455832_15	eggNOG-mapper	1304866.K413DRAFT_3400	NA	NA
UHGV-1455832_16	PHROG	phrog_6493	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1455832_16	UniRef90	UniRef90_UPI001020B14A	DnaD domain protein	NA
UHGV-1455832_16	eggNOG-mapper	1121422.AUMW01000049_gene1257	Transcriptional regulator	NA
UHGV-1455832_16	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1455832_16	Structural annotation	PF05584, NF000243, COG0640	NA	NA
UHGV-1455832_17	UniRef90	UniRef90_UPI0011067A36	helix-turn-helix domain-containing protein	NA
UHGV-1455832_17	eggNOG-mapper	742765.HMPREF9457_03058	NA	NA
UHGV-1455832_17	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-1455832_17	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1455832_17	Structural annotation	PF08784, COG5625	NA	NA
UHGV-1455832_18	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1455832_18	PHROG	phrog_2657	transcriptional regulator	transcription regulation
UHGV-1455832_18	UniRef90	UniRef90_UPI001A9A4A96	antA/AntB antirepressor family protein	NA
UHGV-1455832_18	eggNOG-mapper	33035.JPJF01000043_gene993	NA	NA
UHGV-1455832_18	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-1455832_18	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-1455832_18	Structural annotation	PF09669, NF008573, COG3561	NA	NA
UHGV-1455832_19	PHROG	phrog_28918	NA	unknown function
UHGV-1455832_19	UniRef90	UniRef90_A0A1C5RYZ6	Phage-related protein	NA
UHGV-1455832_19	eggNOG-mapper	1298920.KI911353_gene2649	tape measure	NA
UHGV-1455832_19	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1455832_22	eggNOG-mapper	476272.RUMHYD_01968	NA	NA
UHGV-1455832_22	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-1455832_23	PHROG	phrog_1129	holin	lysis
UHGV-1455832_23	UniRef90	UniRef90_UPI001D072DD9	phage holin family protein	NA
UHGV-1455832_23	eggNOG-mapper	1304866.K413DRAFT_0135	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1455832_23	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1455832_23	Structural annotation	PF16079	NA	NA
UHGV-1455832_24	Structural annotation	PF05657	NA	NA
UHGV-1455832_25	eggNOG-mapper	476272.RUMHYD_01963	NA	NA
UHGV-1455832_26	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1455832_27	UniRef90	UniRef90_A0A4P8ILU7	RHH_1 domain-containing protein	NA
UHGV-1455832_27	Structural annotation	PF01402, NF041793, COG4710	NA	NA
UHGV-1455832_28	eggNOG-mapper	1232452.BAIB02000007_gene1610	NA	NA
UHGV-1455832_29	PHROG	phrog_19695	NA	unknown function
UHGV-1455832_29	eggNOG-mapper	1232452.BAIB02000007_gene1611	NA	NA
UHGV-1455832_29	Structural annotation	PF19714	NA	NA
UHGV-1455832_30	PHROG	phrog_16490	NA	unknown function
UHGV-1455832_30	eggNOG-mapper	658655.HMPREF0988_00917	NA	NA
UHGV-1455832_31	eggNOG-mapper	476272.RUMHYD_01953	NA	NA
UHGV-1455832_32	PHROG	phrog_21718	NA	unknown function
UHGV-1455832_32	eggNOG-mapper	476272.RUMHYD_01952	NA	NA
UHGV-1455832_33	UniRef90	UniRef90_A0A373NQ83	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-1455832_33	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1455832_33	Structural annotation	PF04545, MF_00674, NF001067, COG1342	NA	NA
UHGV-1455832_34	PHROG	phrog_937	hemolysin	other
UHGV-1455832_35	eggNOG-mapper	476272.RUMHYD_01948	NA	NA
UHGV-1455832_36	PHROG	phrog_29	major head protein	head and packaging
UHGV-1455832_36	UniRef90	UniRef90_A0A352P898	S-l_SbsC_C domain-containing protein	NA
UHGV-1455832_36	eggNOG-mapper	1232443.BAIA02000078_gene29	Phage major capsid protein E	NA
UHGV-1455832_36	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-1455832_36	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-1455832_37	PHROG	phrog_909	major head protein	head and packaging
UHGV-1455832_37	UniRef90	UniRef90_K1TUL5	NA	NA
UHGV-1455832_37	eggNOG-mapper	1497679.EP56_02915	NA	NA
UHGV-1455832_37	Structural annotation	PF02924	NA	NA
UHGV-1455832_38	eggNOG-mapper	1298920.KI911353_gene2662	NA	NA
UHGV-1455832_39	PHROG	phrog_64	portal protein	head and packaging
UHGV-1455832_39	UniRef90	UniRef90_A0A373NRD8	Phage portal protein	NA
UHGV-1455832_39	eggNOG-mapper	1298920.KI911353_gene2663	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1455832_39	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1455832_39	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1455832_40	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1455832_40	UniRef90	UniRef90_A0A373NRA4	NA	NA
UHGV-1455832_40	eggNOG-mapper	97138.C820_00221	sigma factor activity	NA
UHGV-1455832_40	Pfam	PF07374	NA	DUF1492
UHGV-1455832_40	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1455832_40	Structural annotation	PF07374, MF_00674, NF008895, COG1342	NA	NA
UHGV-1455832_41	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1455832_41	UniRef90	UniRef90_A0A7X2P7N6	Phage terminase large subunit	NA
UHGV-1455832_41	eggNOG-mapper	476272.RUMHYD_01940	TIGRFAM Phage	NA
UHGV-1455832_41	COG	COG5410	NA	NA
UHGV-1455832_41	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-1455832_42	PHROG	phrog_13999	NA	unknown function
UHGV-1455832_42	eggNOG-mapper	1391428.V5KT07_9CAUD	NA	NA
UHGV-1455832_50	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-1455832_50	UniRef90	UniRef90_A0A417PX36	Nucleotide pyrophosphohydrolase	NA
UHGV-1455832_50	eggNOG-mapper	428125.CLOLEP_01391	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-1455832_50	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-1455832_50	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-1455832_50	Structural annotation	PF03819, MF_01020, TIGR03188, COG1694	NA	NA
UHGV-1455832_52	PHROG	phrog_1048	NA	unknown function
UHGV-1455832_52	UniRef90	UniRef90_UPI001C01A84D	NA	NA
UHGV-1455832_52	eggNOG-mapper	457412.RSAG_01107	NA	NA
UHGV-1455832_52	Pfam	PF11195	NA	DUF2829
UHGV-1455832_52	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-1455832_52	Structural annotation	PF11195	NA	NA
UHGV-1455832_58	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1455832_58	Structural annotation	PF00239, NF009949, COG1961	NA	NA
UHGV-1455832_59	eggNOG-mapper	1232453.BAIF02000058_gene1620	NA	NA