UHGV-1456735

Genome information

Genome length 34,506 bps

CDS count 63

Completeness 95.22% (high-quality)

geNomad score 0.9442

Prediction confidence Confident

Genome information
Genome ID	UHGV-1456735
vOTU ID	vOTU-012986
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0235923
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.22% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	4
Recoded stop codon	No

Viral signal
geNomad score	0.9442
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.32
Jumbo phage	No

Genome content
Genome length	34,506 bps
GC content	33.66%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	63
CDS density	93.45%
Average CDS length	515.81 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1456735_1	PHROG	phrog_338	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1456735_1	UniRef90	UniRef90_UPI0018F1B2FF	HNH endonuclease	NA
UHGV-1456735_1	eggNOG-mapper	1232446.BAIE02000011_gene1603	HNH endonuclease domain protein	NA
UHGV-1456735_1	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1456735_1	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1456735_2	Structural annotation	TIGR01636	NA	NA
UHGV-1456735_4	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1456735_4	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1456735_4	UniRef90	UniRef90_G9R103	SF4 helicase domain-containing protein	NA
UHGV-1456735_4	eggNOG-mapper	1232446.BAIE02000002_gene817	Participates in initiation and elongation during chromosome replication	NA
UHGV-1456735_4	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1456735_4	COG	COG0305	Replicative DNA helicase	NA
UHGV-1456735_4	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1456735_5	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1456735_5	UniRef90	UniRef90_UPI000497F8A6	helix-turn-helix domain-containing protein	NA
UHGV-1456735_5	eggNOG-mapper	1232446.BAIE02000002_gene816	NA	NA
UHGV-1456735_5	Structural annotation	PF01978, MF_01909, TIGR04176, COG3355	NA	NA
UHGV-1456735_6	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-1456735_6	UniRef90	UniRef90_A0A4U9RLZ8	NA	NA
UHGV-1456735_6	eggNOG-mapper	1232446.BAIE02000002_gene815	NA	NA
UHGV-1456735_6	Structural annotation	PF12643, MF_01020, TIGR03188	NA	NA
UHGV-1456735_8	PHROG	phrog_22292	NA	unknown function
UHGV-1456735_8	eggNOG-mapper	1232446.BAIE02000002_gene811	NA	NA
UHGV-1456735_12	eggNOG-mapper	1232446.BAIE02000011_gene1618	NA	NA
UHGV-1456735_14	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1456735_14	PHROG	phrog_216	integrase	integration and excision
UHGV-1456735_14	UniRef90	UniRef90_G9R0Z2	Tyr recombinase domain-containing protein	NA
UHGV-1456735_14	eggNOG-mapper	1232446.BAIE02000002_gene805	Integrase	NA
UHGV-1456735_14	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1456735_14	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1456735_14	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-1456735_15	PHROG	phrog_3886	NA	unknown function
UHGV-1456735_15	eggNOG-mapper	742733.HMPREF9469_05056	NA	NA
UHGV-1456735_16	KOfam	K03744	lemA; LemA protein	NA
UHGV-1456735_16	PHROG	phrog_1383	virion structural protein	head and packaging
UHGV-1456735_16	UniRef90	UniRef90_UPI000E519A27	LemA family protein	NA
UHGV-1456735_16	eggNOG-mapper	742735.HMPREF9467_00879	LemA family	NA
UHGV-1456735_16	Pfam	PF04011	LemA family	LemA
UHGV-1456735_16	COG	COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	NA
UHGV-1456735_16	Structural annotation	PF04011, NF040966, COG1704	NA	NA
UHGV-1456735_20	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1456735_20	UniRef90	UniRef90_G9R0Z0	HNHc domain-containing protein	NA
UHGV-1456735_20	eggNOG-mapper	360911.EAT1b_0007	NUMOD4 motif	NA
UHGV-1456735_20	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1456735_20	Structural annotation	PF13392, PF07453	NA	NA
UHGV-1456735_22	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1456735_22	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1456735_22	UniRef90	UniRef90_UPI000E4FA7A6	site-specific DNA-methyltransferase	NA
UHGV-1456735_22	eggNOG-mapper	1314.HKU360_01238	DNA modification methylase DNA replication, recombination, and repair	NA
UHGV-1456735_22	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-1456735_22	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1456735_22	COG	COG0863	DNA modification methylase	NA
UHGV-1456735_22	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-1456735_26	PHROG	phrog_3634	NA	unknown function
UHGV-1456735_26	eggNOG-mapper	1232446.BAIE02000011_gene1628	nucleoside 2-deoxyribosyltransferase	NA
UHGV-1456735_26	PADLOC	Effector_00071	TIR	CBASS
UHGV-1456735_26	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-1456735_28	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1456735_28	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-1456735_28	UniRef90	UniRef90_UPI0018A922A1	ORF6C domain-containing protein	NA
UHGV-1456735_28	eggNOG-mapper	1232446.BAIE02000002_gene798	ORF6C domain	NA
UHGV-1456735_28	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1456735_28	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-1456735_28	COG	COG3617	Prophage antirepressor	NA
UHGV-1456735_28	Structural annotation	PF02498, PF10552, TIGR02681, COG3617	NA	NA
UHGV-1456735_29	UniRef90	UniRef90_UPI001314138F	helix-turn-helix domain-containing protein	NA
UHGV-1456735_29	eggNOG-mapper	1232446.BAIE02000002_gene796	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1456735_29	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1456735_30	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-1456735_30	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-1456735_30	UniRef90	UniRef90_UPI000E4DDC44	XRE family transcriptional regulator	NA
UHGV-1456735_30	eggNOG-mapper	1232446.BAIE02000002_gene795	NA	NA
UHGV-1456735_30	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1456735_30	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-1456735_30	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-1456735_30	Structural annotation	PF00717, PF01381, MF_00015, NF041951, NF007621, COG2932	NA	NA
UHGV-1456735_31	PHROG	phrog_8043	NA	unknown function
UHGV-1456735_31	UniRef90	UniRef90_UPI001C2C0F0B	HIRAN domain-containing protein	NA
UHGV-1456735_31	eggNOG-mapper	1336234.JAGN01000004_gene559	HIRAN domain	NA
UHGV-1456735_31	Pfam	PF08797	HIRAN domain	HIRAN
UHGV-1456735_32	KOfam	K14059	int; integrase	NA
UHGV-1456735_32	PHROG	phrog_1	integrase	integration and excision
UHGV-1456735_32	UniRef90	UniRef90_UPI000E4CB1B1	site-specific integrase	NA
UHGV-1456735_32	eggNOG-mapper	1232446.BAIE02000011_gene1633	Site-specific recombinase, phage integrase family	NA
UHGV-1456735_32	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-1456735_32	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1456735_32	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1456735_32	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1456735_32	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-1456735_34	eggNOG-mapper	1232446.BAIE02000003_gene848	NA	NA
UHGV-1456735_35	PHROG	phrog_8026	NA	unknown function
UHGV-1456735_35	UniRef90	UniRef90_UPI000E49F7AD	HIRAN domain-containing protein	NA
UHGV-1456735_35	eggNOG-mapper	345219.Bcoa_0821	HIRAN	NA
UHGV-1456735_35	Pfam	PF08797	HIRAN domain	HIRAN
UHGV-1456735_35	Structural annotation	PF08797	NA	NA
UHGV-1456735_36	PHROG	phrog_8728	NA	unknown function
UHGV-1456735_36	UniRef90	UniRef90_UPI000E498C82	HipA domain-containing protein	NA
UHGV-1456735_36	eggNOG-mapper	1122947.FR7_2619	HipA-like C-terminal domain	NA
UHGV-1456735_36	Pfam	PF07804	HipA-like C-terminal domain	HipA_C
UHGV-1456735_36	COG	COG3550	Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module	NA
UHGV-1456735_38	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1456735_38	PHROG	phrog_1794	amidase	lysis
UHGV-1456735_38	UniRef90	UniRef90_A0A3E3E9Q5	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-1456735_38	eggNOG-mapper	1286171.EAL2_c06030	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-1456735_38	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1456735_38	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1456735_38	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1456735_38	Structural annotation	PF01510, PF18342, MF_04111, NF008758, NF040670, COG5632	NA	NA
UHGV-1456735_39	PHROG	phrog_4105	NA	unknown function
UHGV-1456735_39	eggNOG-mapper	1121105.ATXL01000027_gene760	NA	NA
UHGV-1456735_40	PHROG	phrog_1129	holin	lysis
UHGV-1456735_40	UniRef90	UniRef90_A0A0J8Z1S7	Holin protein	NA
UHGV-1456735_40	eggNOG-mapper	1123075.AUDP01000020_gene1532	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1456735_40	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1456735_40	Structural annotation	PF06946	NA	NA
UHGV-1456735_44	eggNOG-mapper	1280698.AUJS01000007_gene1056	NA	NA
UHGV-1456735_44	Structural annotation	PF07703, TIGR02657, COG2372	NA	NA
UHGV-1456735_45	PHROG	phrog_32322	NA	unknown function
UHGV-1456735_45	UniRef90	UniRef90_G9R126	Ig-like_bact domain-containing protein	NA
UHGV-1456735_45	eggNOG-mapper	1232446.BAIE02000011_gene1581	NA	NA
UHGV-1456735_45	Pfam	PF13754	NA	Big_3_4
UHGV-1456735_45	Structural annotation	PF13754	NA	NA
UHGV-1456735_46	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-1456735_46	PHROG	phrog_11157	NA	unknown function
UHGV-1456735_46	UniRef90	UniRef90_G9R125	Big_13 domain-containing protein	NA
UHGV-1456735_46	eggNOG-mapper	1232446.BAIE02000011_gene1582	NA	NA
UHGV-1456735_46	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-1456735_46	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-1456735_46	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-1456735_47	PHROG	phrog_9994	NA	unknown function
UHGV-1456735_47	UniRef90	UniRef90_UPI00156D68EE	H-type lectin domain-containing protein	NA
UHGV-1456735_47	eggNOG-mapper	1232446.BAIE02000011_gene1583	NA	NA
UHGV-1456735_47	Structural annotation	PF20747	NA	NA
UHGV-1456735_48	PHROG	phrog_538	minor tail protein	tail
UHGV-1456735_48	UniRef90	UniRef90_UPI001C0FDE3C	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1456735_48	eggNOG-mapper	1232446.BAIE02000011_gene1584	NA	NA
UHGV-1456735_48	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1456735_48	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-1456735_49	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1456735_49	UniRef90	UniRef90_UPI001F242491	phage tail family protein	NA
UHGV-1456735_49	eggNOG-mapper	1232446.BAIE02000011_gene1585	NA	NA
UHGV-1456735_49	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1456735_50	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1456735_50	UniRef90	UniRef90_UPI000E548070	PblA	NA
UHGV-1456735_50	eggNOG-mapper	1232446.BAIE02000011_gene1587	domain protein	NA
UHGV-1456735_50	COG	COG1511	NA	NA
UHGV-1456735_51	PHROG	phrog_1633	NA	unknown function
UHGV-1456735_51	UniRef90	UniRef90_UPI00189DAD07	NA	NA
UHGV-1456735_51	eggNOG-mapper	585203.SMSK564_1277	NA	NA
UHGV-1456735_51	Pfam	PF17318	NA	DUF5361
UHGV-1456735_51	Structural annotation	PF17318	NA	NA
UHGV-1456735_52	PHROG	phrog_1526	NA	unknown function
UHGV-1456735_52	UniRef90	UniRef90_A0A4U9XM96	NA	NA
UHGV-1456735_52	eggNOG-mapper	1121864.OMO_02159	NA	NA
UHGV-1456735_53	PHROG	phrog_117	major tail protein	tail
UHGV-1456735_53	UniRef90	UniRef90_UPI000E4B8A7F	phage tail protein	NA
UHGV-1456735_53	eggNOG-mapper	1232446.BAIE02000011_gene1591	domain, Protein	NA
UHGV-1456735_53	COG	COG5492	NA	NA
UHGV-1456735_53	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-1456735_54	PHROG	phrog_123	tail terminator	connector
UHGV-1456735_54	eggNOG-mapper	873448.STRPO_0290	NA	NA
UHGV-1456735_54	Structural annotation	PF06141	NA	NA
UHGV-1456735_55	PHROG	phrog_387	neck protein	connector
UHGV-1456735_55	eggNOG-mapper	1423775.BAMN01000011_gene600	NA	NA
UHGV-1456735_56	PHROG	phrog_501	head closure Hc1	connector
UHGV-1456735_56	eggNOG-mapper	1121864.OMO_02155	NA	NA
UHGV-1456735_56	Structural annotation	PF12206, COG5614	NA	NA
UHGV-1456735_57	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-1456735_57	UniRef90	UniRef90_UPI001C2C9563	phage Gp19/Gp15/Gp42 family protein	NA
UHGV-1456735_57	eggNOG-mapper	1232446.BAIE02000011_gene1595	Phage protein Gp19/Gp15/Gp42	NA
UHGV-1456735_57	Pfam	PF09355	NA	Phage_Gp19
UHGV-1456735_57	Structural annotation	PF09355	NA	NA
UHGV-1456735_58	PHROG	phrog_32396	NA	unknown function
UHGV-1456735_58	UniRef90	UniRef90_UPI000E4CCF63	phage major capsid protein	NA
UHGV-1456735_58	eggNOG-mapper	1232446.BAIE02000011_gene1596	Phage capsid family	NA
UHGV-1456735_58	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1456735_58	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1456735_59	PHROG	phrog_233	head scaffolding protein	head and packaging
UHGV-1456735_59	UniRef90	UniRef90_UPI000E52A532	phage scaffold protein	NA
UHGV-1456735_59	eggNOG-mapper	1232446.BAIE02000011_gene1597	NA	NA
UHGV-1456735_59	Structural annotation	PF14265	NA	NA
UHGV-1456735_60	PHROG	phrog_17688	NA	unknown function
UHGV-1456735_60	UniRef90	UniRef90_UPI000E4F1E1B	terminase	NA
UHGV-1456735_60	eggNOG-mapper	879308.HMPREF9130_1231	Phage Terminase	NA
UHGV-1456735_60	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1456735_60	Structural annotation	PF20441, PF03354, MF_04146, NF033889, COG4626	NA	NA
UHGV-1456735_62	PHROG	phrog_2494	minor head protein	head and packaging
UHGV-1456735_62	UniRef90	UniRef90_UPI001C2C9BDC	ADP-ribosyltransferase	NA
UHGV-1456735_62	eggNOG-mapper	1232446.BAIE02000011_gene1601	cell adhesion	NA
UHGV-1456735_62	COG	COG2369	NA	NA
UHGV-1456735_63	PHROG	phrog_104	portal protein	head and packaging
UHGV-1456735_63	UniRef90	UniRef90_UPI000E4B987E	phage portal protein	NA
UHGV-1456735_63	eggNOG-mapper	1232446.BAIE02000011_gene1602	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1456735_63	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA