UHGV-1465099

Genome information

Genome length 35,469 bps

CDS count 51

Completeness 62.80% (medium-quality)

geNomad score 0.9817

Prediction confidence Confident

Genome information
Genome ID	UHGV-1465099
vOTU ID	vOTU-035516
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0241780
BioSample	SAMEA2738027
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.80% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9817
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.39
Jumbo phage	No

Genome content
Genome length	35,469 bps
GC content	38.01%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	51
CDS density	96.61%
Average CDS length	675.94 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1465099_6	UniRef90	UniRef90_UPI001AE428C3	Ig-like domain-containing protein	NA
UHGV-1465099_6	eggNOG-mapper	435842.HMPREF0848_00198	Pilin isopeptide linkage domain protein	NA
UHGV-1465099_6	Pfam	PF17961	Bacterial Ig domain	Big_8
UHGV-1465099_6	Pfam	PF05737	Collagen binding domain	Collagen_bind
UHGV-1465099_6	Pfam	PF00746	LPXTG cell wall anchor motif	Gram_pos_anchor
UHGV-1465099_6	NCBIFam	TIGR01167.1	LPXTG cell wall anchor domain-containing protein	NA
UHGV-1465099_6	COG	COG4932	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	NA
UHGV-1465099_6	Structural annotation	PF05737, PF17961, NF033845, COG4885	NA	NA
UHGV-1465099_9	PHROG	phrog_1485	NA	unknown function
UHGV-1465099_9	eggNOG-mapper	873447.SPB_0706	NA	NA
UHGV-1465099_9	Pfam	PF07659	Nucleotide modification associated domain 1	DUF1599
UHGV-1465099_22	PHROG	phrog_1494	NA	unknown function
UHGV-1465099_31	PHROG	phrog_3810	acetyltransferase	other
UHGV-1465099_31	UniRef90	UniRef90_A0A5J6D6K1	N-acetyltransferase domain-containing protein	NA
UHGV-1465099_31	eggNOG-mapper	1235799.C818_04056	Acetyltransferase (GNAT) domain	NA
UHGV-1465099_31	Pfam	PF13508	Acetyltransferase (GNAT) domain	Acetyltransf_7
UHGV-1465099_31	COG	COG1246	N-acetylglutamate synthase or related acetyltransferase, GNAT family	NA
UHGV-1465099_31	Structural annotation	PF13673, MF_02210, NF007025, COG3981	NA	NA
UHGV-1465099_33	PHROG	phrog_998	endolysin	lysis
UHGV-1465099_33	UniRef90	UniRef90_A0A3R9L8K9	Bacteriophage peptidoglycan hydrolase	NA
UHGV-1465099_33	eggNOG-mapper	873448.STRPO_0302	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-1465099_33	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-1465099_33	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-1465099_33	Structural annotation	PF05382, PF18341, NF033742, COG0791, COG4991	NA	NA
UHGV-1465099_34	PHROG	phrog_1330	tail protein	tail
UHGV-1465099_34	UniRef90	UniRef90_UPI001BDA438C	gp58-like family protein	NA
UHGV-1465099_34	eggNOG-mapper	1214184.ALKY01000039_gene907	Phage minor structural protein	NA
UHGV-1465099_34	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1465099_34	Pfam	PF07902	gp58-like protein	Gp58
UHGV-1465099_34	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1465099_34	COG	COG1511	NA	NA
UHGV-1465099_34	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1465099_35	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1465099_35	UniRef90	UniRef90_A0A069CVZ7	Putative phage tail protein	NA
UHGV-1465099_35	eggNOG-mapper	1329250.WOSG25_220030	phage tail	NA
UHGV-1465099_35	COG	COG4722	Phage-related protein YomH	NA
UHGV-1465099_35	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1465099_36	PHROG	phrog_4372	tail length tape measure protein	tail
UHGV-1465099_36	eggNOG-mapper	428125.CLOLEP_01422	phage tail tape measure protein	NA
UHGV-1465099_36	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1465099_36	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1465099_36	COG	COG5412	Phage-related protein	NA
UHGV-1465099_37	UniRef90	UniRef90_B2BTI1	Structural protein	NA
UHGV-1465099_37	eggNOG-mapper	1476888.X4YWJ1_9CAUD	NA	NA
UHGV-1465099_37	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-1465099_38	PHROG	phrog_4338	NA	unknown function
UHGV-1465099_38	eggNOG-mapper	428125.CLOLEP_01417	NA	NA
UHGV-1465099_39	PHROG	phrog_4282	NA	unknown function
UHGV-1465099_39	eggNOG-mapper	742733.HMPREF9469_05024	NA	NA
UHGV-1465099_40	PHROG	phrog_2645	major tail protein	tail
UHGV-1465099_40	UniRef90	UniRef90_A0A7T0M2B2	Minor tail protein	NA
UHGV-1465099_40	eggNOG-mapper	691965.D4P7D9_9CAUD	peptidase activity	NA
UHGV-1465099_40	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1465099_41	UniRef90	UniRef90_A0A4D6E5Z3	Tail terminator	NA
UHGV-1465099_41	eggNOG-mapper	478749.BRYFOR_08519	NA	NA
UHGV-1465099_41	Structural annotation	PF20765	NA	NA
UHGV-1465099_42	PHROG	phrog_4270	NA	unknown function
UHGV-1465099_42	eggNOG-mapper	428125.CLOLEP_01413	NA	NA
UHGV-1465099_42	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1465099_43	KOfam	K06904	NA	NA
UHGV-1465099_43	PHROG	phrog_3270	head maturation protease	head and packaging
UHGV-1465099_43	UniRef90	UniRef90_A0A6G5Y7H0	BIG2 domain-containing protein	NA
UHGV-1465099_43	eggNOG-mapper	1476888.X4YUP1_9CAUD	peptidase activity	NA
UHGV-1465099_43	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1465099_43	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1465099_43	Structural annotation	PF04586, PF06673, TIGR01543, TIGR01554, COG3740, COG4653	NA	NA
UHGV-1465099_44	PHROG	phrog_12	portal protein	head and packaging
UHGV-1465099_44	UniRef90	UniRef90_UPI001D05DA00	phage portal protein	NA
UHGV-1465099_44	eggNOG-mapper	742740.HMPREF9474_02271	Phage portal protein	NA
UHGV-1465099_44	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1465099_44	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1465099_45	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1465099_45	UniRef90	UniRef90_A0A5C7M263	Terminase	NA
UHGV-1465099_45	eggNOG-mapper	1476888.X4Y7Y5_9CAUD	Phage Terminase	NA
UHGV-1465099_45	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1465099_45	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1465099_45	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1465099_46	PHROG	phrog_19428	NA	unknown function
UHGV-1465099_47	PHROG	phrog_4247	virion structural protein	head and packaging
UHGV-1465099_48	PHROG	phrog_4321	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1465099_48	UniRef90	UniRef90_X4YEE5	Homing endonuclease	NA
UHGV-1465099_48	eggNOG-mapper	475178.B2BTG9_9CAUD	NA	NA
UHGV-1465099_49	PHROG	phrog_4259	NA	unknown function
UHGV-1465099_49	UniRef90	UniRef90_D4P7B9	Gp008	NA
UHGV-1465099_49	eggNOG-mapper	691965.D4P7B9_9CAUD	NA	NA
UHGV-1465099_50	PHROG	phrog_6918	holin	lysis
UHGV-1465099_50	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-1465099_50	Structural annotation	PF09682, TIGR01673	NA	NA