UHGV-1467027

Genome information

vOTU vOTU-031932

Genome length 20,393 bps

CDS count 27

Completeness 51.63% (medium-quality)

geNomad score 0.9797

Prediction confidence Confident

Genome information
Genome ID	UHGV-1467027
vOTU ID	vOTU-031932
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0149213
BioSample	SAMN00991577
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.63% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9797
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	55.12
Jumbo phage	No

Genome content
Genome length	20,393 bps
GC content	50.16%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	27
CDS density	93.30%
Average CDS length	706.44 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1467027_1	PHROG	phrog_1265	membrane protein	moron, auxiliary metabolic gene and host takeover
UHGV-1467027_1	UniRef90	UniRef90_UPI000BD1C3CA	NA	NA
UHGV-1467027_1	eggNOG-mapper	1080067.BAZH01000027_gene3169	NA	NA
UHGV-1467027_1	Pfam	PF20051	NA	DUF6453
UHGV-1467027_2	PHROG	phrog_5616	tail fiber protein	tail
UHGV-1467027_2	UniRef90	UniRef90_A0A2L0TA65	Phage tail protein	NA
UHGV-1467027_2	eggNOG-mapper	1218086.BBNB01000014_gene2049	COG4733 Phage-related protein, tail component	NA
UHGV-1467027_2	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-1467027_2	Pfam	PF09327	NA	DUF1983
UHGV-1467027_2	COG	COG0840	Methyl-accepting chemotaxis protein (MCP)	NA
UHGV-1467027_2	Structural annotation	PF13550, PF09327, PF16323, PF21605, MF_04116, NF040662, NF010681, COG4733	NA	NA
UHGV-1467027_3	PHROG	phrog_2134	NA	unknown function
UHGV-1467027_3	UniRef90	UniRef90_A0A0J8VLI5	NA	NA
UHGV-1467027_3	eggNOG-mapper	1218086.BBNB01000014_gene2050	NA	NA
UHGV-1467027_3	Structural annotation	PF00877, NF008096, COG3738	NA	NA
UHGV-1467027_4	PHROG	phrog_2048	tail protein	tail
UHGV-1467027_4	UniRef90	UniRef90_M1K743	NA	NA
UHGV-1467027_4	eggNOG-mapper	1399774.JDWH01000035_gene2232	NA	NA
UHGV-1467027_4	Structural annotation	PF09931, TIGR01600, COG4672	NA	NA
UHGV-1467027_5	PHROG	phrog_1302	distal tail protein	tail
UHGV-1467027_5	UniRef90	UniRef90_A0A0J8Y927	NA	NA
UHGV-1467027_5	eggNOG-mapper	35703.DQ02_21635	NA	NA
UHGV-1467027_5	Structural annotation	PF09343, TIGR02217, COG4718	NA	NA
UHGV-1467027_6	PHROG	phrog_11851	NA	unknown function
UHGV-1467027_7	PHROG	phrog_339	tail length tape measure protein	tail
UHGV-1467027_7	UniRef90	UniRef90_UPI001904A921	phage tail tape measure protein	NA
UHGV-1467027_7	eggNOG-mapper	35703.DQ02_21640	tape measure protein	NA
UHGV-1467027_7	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1467027_7	Pfam	PF06120	Tail length tape measure protein	Phage_HK97_TLTM
UHGV-1467027_7	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-1467027_7	NCBIFam	TIGR01541.1	phage tail tape measure protein	NA
UHGV-1467027_7	COG	COG5281	Phage-related minor tail protein	NA
UHGV-1467027_7	Structural annotation	PF20155, PF06120, TIGR02338, TIGR01541, COG5281	NA	NA
UHGV-1467027_8	PHROG	phrog_890	lipoprotein	other
UHGV-1467027_8	UniRef90	UniRef90_A0A0F6TUU0	Lipoprotein	NA
UHGV-1467027_8	eggNOG-mapper	906669.G8C7Q7_9CAUD	NA	NA
UHGV-1467027_8	Structural annotation	PF11008, TIGR03000, COG4704	NA	NA
UHGV-1467027_9	PHROG	phrog_14766	tail protein	tail
UHGV-1467027_9	UniRef90	UniRef90_A0A6S5JNV0	Phage tail protein	NA
UHGV-1467027_9	eggNOG-mapper	1147157.K7PJX0_9CAUD	NA	NA
UHGV-1467027_9	Pfam	PF13227	NA	DUF4035
UHGV-1467027_9	Structural annotation	PF06223	NA	NA
UHGV-1467027_10	PHROG	phrog_14766	tail protein	tail
UHGV-1467027_10	UniRef90	UniRef90_A0A6X9AVN7	Phage tail protein	NA
UHGV-1467027_10	eggNOG-mapper	1147157.K7PKV6_9CAUD	Pfam:Phage_TAC_1	NA
UHGV-1467027_10	Pfam	PF06222	Phage tail assembly chaperone	Phage_TAC_1
UHGV-1467027_10	Structural annotation	PF06222	NA	NA
UHGV-1467027_11	PHROG	phrog_158	major tail protein	tail
UHGV-1467027_11	UniRef90	UniRef90_A0A0J1PMV8	Ig-like domain-containing protein	NA
UHGV-1467027_11	eggNOG-mapper	35703.DQ02_21660	NA	NA
UHGV-1467027_11	Pfam	PF13927	Immunoglobulin domain	Ig_3
UHGV-1467027_11	Structural annotation	PF16461, PF13895, MF_04116, TIGR02126, COG5437	NA	NA
UHGV-1467027_12	PHROG	phrog_347	tail terminator	connector
UHGV-1467027_12	UniRef90	UniRef90_A0A3W1D7H9	NA	NA
UHGV-1467027_12	eggNOG-mapper	432200.K7P7Q9_9CAUD	NA	NA
UHGV-1467027_12	Structural annotation	PF11367	NA	NA
UHGV-1467027_13	PHROG	phrog_23409	NA	unknown function
UHGV-1467027_13	UniRef90	UniRef90_UPI000F680D9C	HK97 gp10 family phage protein	NA
UHGV-1467027_13	eggNOG-mapper	35703.DQ02_21670	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1467027_13	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1467027_13	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1467027_13	Structural annotation	TIGR01725	NA	NA
UHGV-1467027_14	PHROG	phrog_25	head closure Hc1	connector
UHGV-1467027_14	UniRef90	UniRef90_UPI000B49D757	phage head closure protein	NA
UHGV-1467027_14	eggNOG-mapper	399742.Ent638_2233	head-tail adaptor	NA
UHGV-1467027_14	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1467027_14	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1467027_14	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1467027_14	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1467027_15	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-1467027_15	UniRef90	UniRef90_UPI0018A574A9	head-tail connector protein	NA
UHGV-1467027_15	eggNOG-mapper	1410619.SRDD_27480	Phage gp6-like head-tail connector protein	NA
UHGV-1467027_15	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1467027_15	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1467027_15	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1467027_16	PHROG	phrog_10	major head protein	head and packaging
UHGV-1467027_16	UniRef90	UniRef90_A0A345C9L3	Phage major capsid protein	NA
UHGV-1467027_16	eggNOG-mapper	399742.Ent638_2598	TIGRFAM Phage major capsid protein, HK97	NA
UHGV-1467027_16	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1467027_16	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1467027_16	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1467027_16	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1467027_17	KOfam	K06904	NA	NA
UHGV-1467027_17	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1467027_17	UniRef90	UniRef90_A0A133LFS7	Phage prohead protease, HK97 family	NA
UHGV-1467027_17	eggNOG-mapper	667121.ET1_08_01070	Prohead protease	NA
UHGV-1467027_17	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1467027_17	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1467027_17	COG	COG3740	Phage head maturation protease	NA
UHGV-1467027_17	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1467027_18	PHROG	phrog_12	portal protein	head and packaging
UHGV-1467027_18	UniRef90	UniRef90_A0A7I7A5G0	Portal protein	NA
UHGV-1467027_18	eggNOG-mapper	399742.Ent638_2600	TIGRFAM Phage portal protein, HK97	NA
UHGV-1467027_18	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1467027_18	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1467027_18	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1467027_18	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1467027_19	PHROG	phrog_7105	NA	unknown function
UHGV-1467027_19	UniRef90	UniRef90_A0A163XUY0	Membrane protein	NA
UHGV-1467027_19	eggNOG-mapper	520999.PROVALCAL_02013	NA	NA
UHGV-1467027_20	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1467027_20	UniRef90	UniRef90_A0A133LFK9	Putative phage terminase, large subunit	NA
UHGV-1467027_20	eggNOG-mapper	1440052.EAKF1_ch0466c	Phage Terminase	NA
UHGV-1467027_20	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1467027_20	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1467027_20	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1467027_20	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1467027_21	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1467027_21	UniRef90	UniRef90_A0A7L5NYS6	Phage terminase small subunit P27 family	NA
UHGV-1467027_21	eggNOG-mapper	1524467.IV04_14600	Phage terminase, small subunit	NA
UHGV-1467027_21	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1467027_21	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1467027_21	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1467027_21	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1467027_22	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1467027_22	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1467027_22	UniRef90	UniRef90_A0A768C333	HNH endonuclease	NA
UHGV-1467027_22	eggNOG-mapper	640513.Entas_3084	HNH endonuclease	NA
UHGV-1467027_22	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1467027_22	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1467027_22	Structural annotation	PF01844, COG1403	NA	NA
UHGV-1467027_23	PHROG	phrog_10235	NA	unknown function
UHGV-1467027_25	PHROG	phrog_1026	Rz-like spanin	lysis
UHGV-1467027_25	eggNOG-mapper	573.JG24_10940	NA	NA
UHGV-1467027_26	KOfam	K03791	K03791; putative chitinase	NA
UHGV-1467027_26	PHROG	phrog_181	endolysin	lysis
UHGV-1467027_26	UniRef90	UniRef90_A0A0J1PK93	Glyco_hydro_19_cat domain-containing protein	NA
UHGV-1467027_26	eggNOG-mapper	35703.DQ02_24200	Chitinase class I	NA
UHGV-1467027_26	Pfam	PF00182	Chitinase class I	Glyco_hydro_19
UHGV-1467027_26	COG	COG3179	Chitinase, GH19 family	NA
UHGV-1467027_26	Structural annotation	PF00182, TIGR02282, COG3179	NA	NA
UHGV-1467027_27	PHROG	phrog_217	holin	lysis
UHGV-1467027_27	UniRef90	UniRef90_A0A376HX08	Phage membrane protein	NA
UHGV-1467027_27	eggNOG-mapper	469595.CSAG_00950	Putative 3TM holin, Phage_holin_3	NA
UHGV-1467027_27	Pfam	PF05449	Putative 3TM holin, Phage_holin_3	Phage_holin_3_7