UHGV-1482349

Genome information

vOTU vOTU-020204

Genome length 16,764 bps

CDS count 22

Completeness 74.17% (medium-quality)

geNomad score 0.9703

Prediction confidence Confident

Genome information
Genome ID	UHGV-1482349
vOTU ID	vOTU-020204
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0114446
BioSample	SAMEA4545396
Country	Kazakhstan
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	74.17% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9703
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.07
Jumbo phage	No

Genome content
Genome length	16,764 bps
GC content	37.66%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	22
CDS density	87.22%
Average CDS length	665.73 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1482349_1	PHROG	phrog_2234	tail spike protein	tail
UHGV-1482349_1	UniRef90	UniRef90_UPI00115947A5	right-handed parallel beta-helix repeat-containing protein	NA
UHGV-1482349_1	eggNOG-mapper	986075.CathTA2_0709	Pectate lyase superfamily protein	NA
UHGV-1482349_1	Pfam	PF13229	Right handed beta helix region	Beta_helix
UHGV-1482349_1	COG	COG5434	Polygalacturonase	NA
UHGV-1482349_3	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1482349_3	eggNOG-mapper	10753.B7SSN2_BPNF	NA	NA
UHGV-1482349_4	PHROG	phrog_2038	upper collar connector	connector
UHGV-1482349_4	UniRef90	UniRef90_R5N5I0	Connector protein	NA
UHGV-1482349_4	eggNOG-mapper	338473.A6XAD7_9CAUD	Phage Connector (GP10)	NA
UHGV-1482349_4	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1482349_4	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1482349_5	PHROG	phrog_2248	tail protein	tail
UHGV-1482349_5	UniRef90	UniRef90_A0A843HN65	Caud_tail_N domain-containing protein	NA
UHGV-1482349_5	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-1482349_5	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1482349_5	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1482349_5	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1482349_7	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1482349_7	UniRef90	UniRef90_A0A843HGC7	Ig-like domain-containing protein	NA
UHGV-1482349_7	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-1482349_7	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1482349_9	UniRef90	UniRef90_A0A3B9GPY5	Phage_lysozyme2 domain-containing protein	NA
UHGV-1482349_9	eggNOG-mapper	33035.JPJF01000023_gene3229	NA	NA
UHGV-1482349_9	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1482349_9	Structural annotation	PF18013	NA	NA
UHGV-1482349_10	PHROG	phrog_7698	endolysin	lysis
UHGV-1482349_10	UniRef90	UniRef90_A0A3B9GPW1	Cpl-7 domain-containing protein	NA
UHGV-1482349_10	eggNOG-mapper	1121914.AUDW01000002_gene666	Ami_2	NA
UHGV-1482349_10	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-1482349_10	COG	COG1388	LysM repeat	NA
UHGV-1482349_10	Structural annotation	PF08230	NA	NA
UHGV-1482349_11	PHROG	phrog_9829	NA	unknown function
UHGV-1482349_12	PHROG	phrog_2150	terminase	head and packaging
UHGV-1482349_12	UniRef90	UniRef90_A0A843HIN8	Phage DNA encapsidation protein	NA
UHGV-1482349_12	eggNOG-mapper	1094755.MCO_01569	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1482349_12	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1482349_12	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1482349_14	Structural annotation	PF17427	NA	NA
UHGV-1482349_16	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1482349_16	UniRef90	UniRef90_A0A316S5V3	DNA-directed DNA polymerase	NA
UHGV-1482349_16	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA