UHGV-1483755

Genome information

Genome length 26,616 bps

CDS count 43

Completeness 71.80% (medium-quality)

geNomad score 0.9808

Prediction confidence Confident

Genome information
Genome ID	UHGV-1483755
vOTU ID	vOTU-035805
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0192191
BioSample	NA
Country	Spain
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.80% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9808
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.7
Jumbo phage	No

Genome content
Genome length	26,616 bps
GC content	56.62%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	43
CDS density	93.72%
Average CDS length	583.74 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1483755_1	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-1483755_2	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-1483755_2	Structural annotation	PF12510	NA	NA
UHGV-1483755_3	PHROG	phrog_20016	NA	unknown function
UHGV-1483755_3	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1483755_3	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1483755_3	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1483755_4	PHROG	phrog_16490	NA	unknown function
UHGV-1483755_4	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1483755_5	PHROG	phrog_22984	NA	unknown function
UHGV-1483755_6	PHROG	phrog_21718	NA	unknown function
UHGV-1483755_6	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1483755_7	PHROG	phrog_3754	NA	unknown function
UHGV-1483755_7	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-1483755_8	UniRef90	UniRef90_A0A8D9PDT6	Transcriptional regulatory protein	NA
UHGV-1483755_9	PHROG	phrog_1129	holin	lysis
UHGV-1483755_9	UniRef90	UniRef90_A0A3D4QXE9	Enolase	NA
UHGV-1483755_9	eggNOG-mapper	693746.OBV_13280	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1483755_9	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1483755_9	Structural annotation	PF06946	NA	NA
UHGV-1483755_10	PHROG	phrog_937	hemolysin	other
UHGV-1483755_10	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-1483755_11	PHROG	phrog_21357	endolysin	lysis
UHGV-1483755_11	UniRef90	UniRef90_UPI001C0141B9	glucosaminidase domain-containing protein	NA
UHGV-1483755_11	eggNOG-mapper	243164.DET1070	SMART Glycoside hydrolase, family 25 subgroup	NA
UHGV-1483755_11	Pfam	PF05257	CHAP domain	CHAP
UHGV-1483755_11	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-1483755_11	COG	COG1388	LysM repeat	NA
UHGV-1483755_11	Structural annotation	PF10030, TIGR02594, COG4322	NA	NA
UHGV-1483755_13	PHROG	phrog_9534	head protein	head and packaging
UHGV-1483755_13	eggNOG-mapper	748224.HMPREF9436_00702	COG NOG18825 non supervised orthologous group	NA
UHGV-1483755_13	Structural annotation	PF20747	NA	NA
UHGV-1483755_14	PHROG	phrog_538	minor tail protein	tail
UHGV-1483755_14	UniRef90	UniRef90_UPI001C113FEF	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1483755_14	eggNOG-mapper	931626.Awo_c30930	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-1483755_14	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1483755_14	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1483755_15	PHROG	phrog_36410	NA	unknown function
UHGV-1483755_15	UniRef90	UniRef90_UPI001C0FCFFA	phage tail family protein	NA
UHGV-1483755_15	eggNOG-mapper	411471.SUBVAR_06982	Phage tail protein	NA
UHGV-1483755_15	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1483755_16	PHROG	phrog_23464	NA	unknown function
UHGV-1483755_16	eggNOG-mapper	665950.HMPREF1025_02660	phage tail tape measure protein	NA
UHGV-1483755_16	COG	COG5283	Phage-related tail protein	NA
UHGV-1483755_16	Structural annotation	PF20155, MF_04138	NA	NA
UHGV-1483755_18	PHROG	phrog_885	major tail protein	tail
UHGV-1483755_18	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1483755_18	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-1483755_18	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1483755_19	Structural annotation	PF11367	NA	NA
UHGV-1483755_20	PHROG	phrog_17977	NA	unknown function
UHGV-1483755_20	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1483755_20	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1483755_20	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1483755_22	PHROG	phrog_267	major head protein	head and packaging
UHGV-1483755_22	UniRef90	UniRef90_A0A3Q9B9E4	P22 coat protein-protein 5 domain protein	NA
UHGV-1483755_22	eggNOG-mapper	877414.ATWA01000001_gene909	P22 coat protein-protein 5 domain protein	NA
UHGV-1483755_22	Pfam	PF19821	Phage capsid protein	Phage_capsid_2
UHGV-1483755_22	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1483755_23	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-1483755_23	Structural annotation	PF06810	NA	NA
UHGV-1483755_24	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1483755_24	UniRef90	UniRef90_UPI0015C5E40B	HK97 gp10 family phage protein	NA
UHGV-1483755_24	eggNOG-mapper	683837.lse_1605	NA	NA
UHGV-1483755_24	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1483755_24	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1483755_26	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-1483755_26	UniRef90	UniRef90_A0A4D7AUA1	Phage head morphogenesis protein	NA
UHGV-1483755_26	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-1483755_26	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1483755_26	COG	COG2369	NA	NA
UHGV-1483755_26	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1483755_27	PHROG	phrog_64	portal protein	head and packaging
UHGV-1483755_27	UniRef90	UniRef90_UPI0018A8A301	phage portal protein	NA
UHGV-1483755_27	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1483755_27	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1483755_27	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1483755_28	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1483755_28	UniRef90	UniRef90_UPI00046F67CE	terminase family protein	NA
UHGV-1483755_28	eggNOG-mapper	1140001.I571_01829	NA	NA
UHGV-1483755_28	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5323	NA	NA
UHGV-1483755_29	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1483755_29	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1483755_29	UniRef90	UniRef90_A0A1I5G7W6	Phage terminase small subunit	NA
UHGV-1483755_29	eggNOG-mapper	445971.ANASTE_00710	Terminase small subunit	NA
UHGV-1483755_29	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1483755_29	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1483755_29	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1483755_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1483755_30	UniRef90	UniRef90_UPI001C10AB33	NA	NA
UHGV-1483755_30	eggNOG-mapper	428125.CLOLEP_01806	NA	NA
UHGV-1483755_30	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-1483755_36	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1483755_36	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1483755_36	UniRef90	UniRef90_A0A2K2TY62	Adenylyl-sulfate reductase	NA
UHGV-1483755_36	eggNOG-mapper	411902.CLOBOL_06768	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-1483755_36	PADLOC	BrxP_00001	BrxP	BREX
UHGV-1483755_36	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1483755_36	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1483755_36	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-1483755_38	PHROG	phrog_3392	NA	unknown function
UHGV-1483755_38	UniRef90	UniRef90_A8AT45	Gp21	NA
UHGV-1483755_38	eggNOG-mapper	1217710.F969_00044	NA	NA
UHGV-1483755_38	Pfam	PF04448	NA	DUF551
UHGV-1483755_38	Structural annotation	NF041588	NA	NA
UHGV-1483755_40	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1483755_40	UniRef90	UniRef90_UPI000FF8D02D	AP2 domain-containing protein	NA
UHGV-1483755_40	eggNOG-mapper	478749.BRYFOR_05054	AP2 domain protein	NA
UHGV-1483755_40	Structural annotation	PF17375	NA	NA
UHGV-1483755_41	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1483755_41	UniRef90	UniRef90_A0A533R9G2	Holliday junction endonuclease	NA
UHGV-1483755_41	eggNOG-mapper	329726.AM1_4255	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	NA
UHGV-1483755_41	COG	COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	NA
UHGV-1483755_41	Structural annotation	PF16921, MF_00034, NF000711, COG0817	NA	NA
UHGV-1483755_42	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1483755_42	UniRef90	UniRef90_A0A417JTT5	DNA cytosine methyltransferase	NA
UHGV-1483755_42	eggNOG-mapper	1095750.HMPREF9970_0173	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1483755_42	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1483755_42	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA