UHGV-1484745

Genome information

Genome length 26,611 bps

CDS count 30

Completeness 68.78% (medium-quality)

geNomad score 0.9765

Prediction confidence Confident

Genome information
Genome ID	UHGV-1484745
vOTU ID	vOTU-035820
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0192157
BioSample	SAMEA3136695
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	68.78% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9765
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.27
Jumbo phage	No

Genome content
Genome length	26,611 bps
GC content	29.17%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	30
CDS density	93.51%
Average CDS length	831.40 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1484745_1	PHROG	phrog_199	holin	lysis
UHGV-1484745_1	UniRef90	UniRef90_UPI00140FD175	phage holin family protein	NA
UHGV-1484745_1	eggNOG-mapper	1232449.BAHV02000008_gene653	Bacteriophage holin family	NA
UHGV-1484745_1	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1484745_1	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1484745_1	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1484745_1	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1484745_2	PHROG	phrog_16573	NA	unknown function
UHGV-1484745_2	eggNOG-mapper	880073.Calab_2766	oxidoreductase activity	NA
UHGV-1484745_2	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-1484745_2	COG	COG2304	Secreted protein containing bacterial Ig-like domain and vWFA domain	NA
UHGV-1484745_3	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-1484745_3	UniRef90	UniRef90_UPI00164A835E	phage tail protein	NA
UHGV-1484745_3	eggNOG-mapper	1292035.H476_1004	Prophage endopeptidase tail	NA
UHGV-1484745_3	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1484745_3	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1484745_3	COG	COG4926	Phage-related protein	NA
UHGV-1484745_3	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1484745_4	UniRef90	UniRef90_UPI000DD01D50	phage tail family protein	NA
UHGV-1484745_4	eggNOG-mapper	1280689.AUJC01000011_gene1531	phage tail	NA
UHGV-1484745_4	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-1484745_4	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1484745_4	COG	COG4722	Phage-related protein YomH	NA
UHGV-1484745_4	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1484745_5	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-1484745_5	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1484745_5	UniRef90	UniRef90_UPI00164B849B	phage tail tape measure protein	NA
UHGV-1484745_5	eggNOG-mapper	1151292.QEW_0351	Phage-related minor tail protein	NA
UHGV-1484745_5	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1484745_5	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1484745_5	COG	COG5283	Phage-related tail protein	NA
UHGV-1484745_5	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1484745_6	eggNOG-mapper	1476973.JMMB01000007_gene1770	NA	NA
UHGV-1484745_7	PHROG	phrog_88	major tail protein	tail
UHGV-1484745_7	UniRef90	UniRef90_B1V2P3	Phage major tail protein, Phi13 family	NA
UHGV-1484745_7	eggNOG-mapper	1201292.DR75_1505	Maj_tail_phi13 phage major tail , phi13 family protein	NA
UHGV-1484745_7	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1484745_7	COG	COG5492	NA	NA
UHGV-1484745_7	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-1484745_8	PHROG	phrog_78	tail terminator	connector
UHGV-1484745_8	eggNOG-mapper	1487921.DP68_11350	NA	NA
UHGV-1484745_8	Structural annotation	PF05657, NF040576, COG3167	NA	NA
UHGV-1484745_9	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1484745_9	UniRef90	UniRef90_UPI00164C9F08	HK97 gp10 family phage protein	NA
UHGV-1484745_9	eggNOG-mapper	1476973.JMMB01000007_gene1766	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1484745_9	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1484745_9	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1484745_9	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-1484745_10	PHROG	phrog_11176	head-tail adaptor	connector
UHGV-1484745_10	UniRef90	UniRef90_UPI00164ACD7E	phage head closure protein	NA
UHGV-1484745_10	eggNOG-mapper	1347392.CCEZ01000045_gene13	NA	NA
UHGV-1484745_10	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1484745_10	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1484745_10	Structural annotation	PF05521, PF07405, TIGR01563, COG5614	NA	NA
UHGV-1484745_11	PHROG	phrog_749	NA	unknown function
UHGV-1484745_11	UniRef90	UniRef90_A0A1I3QJG6	Phage gp6-like head-tail connector protein	NA
UHGV-1484745_11	eggNOG-mapper	349161.Dred_2603	NA	NA
UHGV-1484745_12	PHROG	phrog_10	major head protein	head and packaging
UHGV-1484745_12	UniRef90	UniRef90_UPI00164AB0C3	phage major capsid protein	NA
UHGV-1484745_12	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-1484745_12	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1484745_12	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1484745_12	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1484745_12	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1484745_13	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1484745_13	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1484745_13	UniRef90	UniRef90_A0A316S6S6	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1484745_13	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-1484745_13	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1484745_13	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1484745_13	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-1484745_14	PHROG	phrog_12	portal protein	head and packaging
UHGV-1484745_14	UniRef90	UniRef90_UPI00164CC1C1	phage portal protein	NA
UHGV-1484745_14	eggNOG-mapper	86416.Clopa_0339	Phage portal protein	NA
UHGV-1484745_14	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1484745_14	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1484745_14	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1484745_14	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1484745_15	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1484745_15	UniRef90	UniRef90_UPI00164CCF79	terminase large subunit	NA
UHGV-1484745_15	eggNOG-mapper	1235798.C817_02581	Phage terminase-like protein large subunit	NA
UHGV-1484745_15	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1484745_15	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1484745_15	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1484745_15	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1484745_16	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-1484745_16	UniRef90	UniRef90_UPI00164B2843	RNA polymerase subunit sigma-70	NA
UHGV-1484745_16	eggNOG-mapper	574375.BAGA_00220	Phage terminase, small subunit	NA
UHGV-1484745_16	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1484745_16	COG	COG5484	NA	NA
UHGV-1484745_16	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1484745_17	PHROG	phrog_1315	NA	unknown function
UHGV-1484745_18	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1484745_18	UniRef90	UniRef90_A0A1G9I4W9	Sigma-70, region 4	NA
UHGV-1484745_18	eggNOG-mapper	1196322.A370_01361	DNA-templated transcription, initiation	NA
UHGV-1484745_18	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-1484745_18	Structural annotation	PF06530, TIGR01636	NA	NA
UHGV-1484745_19	PHROG	phrog_25509	NA	unknown function
UHGV-1484745_19	eggNOG-mapper	1280689.AUJC01000003_gene942	NA	NA
UHGV-1484745_21	PHROG	phrog_1672	NA	unknown function
UHGV-1484745_21	UniRef90	UniRef90_A0A3P6KCP8	NA	NA
UHGV-1484745_21	eggNOG-mapper	632245.CLP_2710	NA	NA
UHGV-1484745_24	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1484745_24	PHROG	phrog_4715	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1484745_24	UniRef90	UniRef90_UPI001783B16D	ParB N-terminal domain-containing protein	NA
UHGV-1484745_24	eggNOG-mapper	1196322.A370_05736	Belongs to the ParB family	NA
UHGV-1484745_24	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1484745_24	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1484745_24	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-1484745_25	PHROG	phrog_98	NA	unknown function
UHGV-1484745_25	UniRef90	UniRef90_UPI0007743819	YopX family protein	NA
UHGV-1484745_25	eggNOG-mapper	1196322.A370_05737	YopX protein	NA
UHGV-1484745_25	Pfam	PF09643	YopX protein	YopX
UHGV-1484745_25	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1484745_27	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-1484745_27	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1484745_27	UniRef90	UniRef90_UPI001782A302	ParA family protein	NA
UHGV-1484745_27	eggNOG-mapper	1415774.U728_486	Cellulose biosynthesis protein BcsQ	NA
UHGV-1484745_27	Pfam	PF13614	AAA domain	AAA_31
UHGV-1484745_27	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-1484745_27	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-1484745_28	PHROG	phrog_824	NA	unknown function
UHGV-1484745_28	UniRef90	UniRef90_UPI0018AB58EB	VRR-NUC domain-containing protein	NA
UHGV-1484745_28	eggNOG-mapper	1414720.CBYM010000002_gene588	VRR-NUC domain	NA
UHGV-1484745_28	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1484745_28	Structural annotation	PF08774	NA	NA
UHGV-1484745_29	PHROG	phrog_1065	NA	unknown function
UHGV-1484745_29	UniRef90	UniRef90_A0A161XG28	HTH DNA binding domain protein	NA
UHGV-1484745_29	eggNOG-mapper	1443122.Z958_p0016	NA	NA
UHGV-1484745_30	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1484745_30	eggNOG-mapper	1414720.CBYM010000002_gene589	NA	NA