UHGV-1491218

Genome information

vOTU vOTU-019577

Genome length 39,192 bps

CDS count 53

Completeness 89.30% (medium-quality)

geNomad score 0.9750

Prediction confidence Confident

Genome information
Genome ID	UHGV-1491218
vOTU ID	vOTU-019577
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0264222
BioSample	SAMEA3136733
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	89.30% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	31
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9750
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	77.3
Jumbo phage	No

Genome content
Genome length	39,192 bps
GC content	56.40%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	53
CDS density	91.74%
Average CDS length	681.57 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1491218_1	UniRef90	UniRef90_UPI001C00C6D4	HD domain-containing protein	NA
UHGV-1491218_1	Pfam	PF01966	HD domain	HD
UHGV-1491218_2	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1491218_2	PHROG	phrog_435	endolysin	lysis
UHGV-1491218_2	UniRef90	UniRef90_UPI001D0E5BDE	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1491218_2	eggNOG-mapper	1408437.JNJN01000040_gene194	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1491218_2	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1491218_2	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1491218_2	Structural annotation	PF01520, PF09992, MF_00417, TIGR02883, COG0860, COG4632	NA	NA
UHGV-1491218_3	UniRef90	UniRef90_A0A396Q9G4	Phage holin	NA
UHGV-1491218_3	eggNOG-mapper	935836.JAEL01000005_gene2687	Bacteriophage holin	NA
UHGV-1491218_3	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-1491218_3	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-1491218_3	COG	COG5546	NA	NA
UHGV-1491218_3	Structural annotation	COG5546	NA	NA
UHGV-1491218_4	PHROG	phrog_937	hemolysin	other
UHGV-1491218_4	eggNOG-mapper	478749.BRYFOR_07561	NA	NA
UHGV-1491218_5	PHROG	phrog_7805	NA	unknown function
UHGV-1491218_5	UniRef90	UniRef90_UPI000344CA94	SEC-C domain-containing protein	NA
UHGV-1491218_5	eggNOG-mapper	387344.LVIS_A02	NA	NA
UHGV-1491218_6	PHROG	phrog_134	NA	unknown function
UHGV-1491218_6	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1491218_6	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1491218_7	eggNOG-mapper	1519439.JPJG01000060_gene1895	NA	NA
UHGV-1491218_7	Structural annotation	PF10618	NA	NA
UHGV-1491218_10	PHROG	phrog_521	tail protein	tail
UHGV-1491218_10	UniRef90	UniRef90_A0A417BYZ7	NA	NA
UHGV-1491218_10	eggNOG-mapper	1408437.JNJN01000045_gene575	NA	NA
UHGV-1491218_10	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-1491218_10	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-1491218_10	Structural annotation	PF10076, TIGR02242, COG3778	NA	NA
UHGV-1491218_11	PHROG	phrog_1608	tail protein	tail
UHGV-1491218_11	UniRef90	UniRef90_A0A417BYX8	Phage tail protein	NA
UHGV-1491218_11	eggNOG-mapper	1408437.JNJN01000045_gene576	Baseplate J-like protein	NA
UHGV-1491218_11	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1491218_11	COG	COG3299	NA	NA
UHGV-1491218_11	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-1491218_12	PHROG	phrog_120	baseplate protein	tail
UHGV-1491218_12	UniRef90	UniRef90_A0A3E2XZ30	NA	NA
UHGV-1491218_12	eggNOG-mapper	1408437.JNJN01000045_gene577	NA	NA
UHGV-1491218_12	Pfam	PF10934	NA	DUF2634
UHGV-1491218_12	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-1491218_12	Structural annotation	PF10934, TIGR03357, COG3628	NA	NA
UHGV-1491218_13	PHROG	phrog_579	NA	unknown function
UHGV-1491218_13	UniRef90	UniRef90_A0A417TSE7	NA	NA
UHGV-1491218_13	eggNOG-mapper	1567012.A0A0A7RTJ2_9VIRU	NA	NA
UHGV-1491218_13	Pfam	PF10844	NA	DUF2577
UHGV-1491218_13	Structural annotation	PF10844	NA	NA
UHGV-1491218_14	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1491218_14	PHROG	phrog_400	tail protein	tail
UHGV-1491218_14	UniRef90	UniRef90_A0A417IT88	Peptidase_M23 domain-containing protein	NA
UHGV-1491218_14	eggNOG-mapper	1408437.JNJN01000045_gene579	PFAM Phage late control gene D protein (GPD)	NA
UHGV-1491218_14	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1491218_14	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-1491218_14	Structural annotation	PF01551, PF05954, MF_02071, NF040883, NF033848, TIGR00413, COG0739, COG4379, COG3584	NA	NA
UHGV-1491218_15	PHROG	phrog_380	endolysin	lysis
UHGV-1491218_15	UniRef90	UniRef90_A0A417HNW8	LysM domain-containing protein	NA
UHGV-1491218_15	eggNOG-mapper	1408437.JNJN01000045_gene580	LysM domain	NA
UHGV-1491218_15	Pfam	PF01476	LysM domain	LysM
UHGV-1491218_15	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-1491218_15	Structural annotation	PF21821, TIGR02126, COG3499	NA	NA
UHGV-1491218_16	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-1491218_16	UniRef90	UniRef90_A0A417BYU2	TMP_3 domain-containing protein	NA
UHGV-1491218_16	eggNOG-mapper	1408437.JNJN01000045_gene581	tape measure	NA
UHGV-1491218_16	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1491218_16	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1491218_16	COG	COG5281	Phage-related minor tail protein	NA
UHGV-1491218_16	Structural annotation	PF20155, COG3941	NA	NA
UHGV-1491218_17	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-1491218_17	UniRef90	UniRef90_A0A3E2XXX4	Phage portal protein	NA
UHGV-1491218_17	eggNOG-mapper	1408437.JNJN01000045_gene583	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-1491218_17	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-1491218_17	Structural annotation	PF08890, COG4518	NA	NA
UHGV-1491218_18	PHROG	phrog_365	tail protein	tail
UHGV-1491218_18	UniRef90	UniRef90_UPI00164A7994	phage tail tube protein	NA
UHGV-1491218_18	eggNOG-mapper	1408437.JNJN01000045_gene584	Phage tail tube protein	NA
UHGV-1491218_18	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-1491218_18	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-1491218_19	PHROG	phrog_279	tail sheath	tail
UHGV-1491218_19	UniRef90	UniRef90_A0A3E2XXT6	Phage tail protein	NA
UHGV-1491218_19	eggNOG-mapper	1408437.JNJN01000045_gene585	Phage tail sheath C-terminal domain	NA
UHGV-1491218_19	Pfam	PF17481	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
UHGV-1491218_19	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-1491218_19	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-1491218_19	Structural annotation	PF17482, PF04984, PF17481, COG4386	NA	NA
UHGV-1491218_20	PHROG	phrog_966	NA	unknown function
UHGV-1491218_20	eggNOG-mapper	1408437.JNJN01000045_gene586	NA	NA
UHGV-1491218_21	PHROG	phrog_525	NA	unknown function
UHGV-1491218_21	UniRef90	UniRef90_T3D6E7	Putative phage protein	NA
UHGV-1491218_21	eggNOG-mapper	1408437.JNJN01000045_gene587	NA	NA
UHGV-1491218_21	Pfam	PF20765	NA	DUF6838
UHGV-1491218_21	Structural annotation	PF20765, COG5003	NA	NA
UHGV-1491218_22	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1491218_22	UniRef90	UniRef90_A0A396Q518	HK97 gp10 family phage protein	NA
UHGV-1491218_22	eggNOG-mapper	1408437.JNJN01000045_gene588	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1491218_22	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1491218_22	Structural annotation	PF04883, TIGR01725, COG5005	NA	NA
UHGV-1491218_23	PHROG	phrog_615	head-tail adaptor	connector
UHGV-1491218_23	UniRef90	UniRef90_UPI001B11203B	NA	NA
UHGV-1491218_23	eggNOG-mapper	1408437.JNJN01000045_gene589	NA	NA
UHGV-1491218_23	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-1491218_24	PHROG	phrog_132	head-tail adaptor	connector
UHGV-1491218_24	UniRef90	UniRef90_A0A6N2R673	Phage gp6-like head-tail connector protein	NA
UHGV-1491218_24	eggNOG-mapper	97138.C820_00227	Phage gp6-like head-tail connector protein	NA
UHGV-1491218_24	Structural annotation	PF05135	NA	NA
UHGV-1491218_25	eggNOG-mapper	935836.JAEL01000086_gene51	NA	NA
UHGV-1491218_26	PHROG	phrog_212	major head protein	head and packaging
UHGV-1491218_26	UniRef90	UniRef90_A0A3E2XZN2	Phage capsid protein	NA
UHGV-1491218_26	eggNOG-mapper	1408437.JNJN01000045_gene592	NA	NA
UHGV-1491218_26	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-1491218_27	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1491218_27	UniRef90	UniRef90_UPI0004E27E71	phage scaffolding protein	NA
UHGV-1491218_27	eggNOG-mapper	1408437.JNJN01000045_gene593	Phage minor structural protein GP20	NA
UHGV-1491218_27	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1491218_27	Structural annotation	PF06810	NA	NA
UHGV-1491218_28	Structural annotation	PF07073, MF_00436, TIGR02383, COG4568	NA	NA
UHGV-1491218_30	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1491218_30	UniRef90	UniRef90_A0A3E2XXY5	Phage_Mu_F domain-containing protein	NA
UHGV-1491218_30	eggNOG-mapper	1408437.JNJN01000045_gene594	head morphogenesis protein, SPP1 gp7 family	NA
UHGV-1491218_30	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1491218_30	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-1491218_30	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1491218_30	COG	COG2369	NA	NA
UHGV-1491218_30	Structural annotation	PF03496, PF04233, MF_04141, NF041404, TIGR01641, COG2369	NA	NA
UHGV-1491218_31	PHROG	phrog_64	portal protein	head and packaging
UHGV-1491218_31	UniRef90	UniRef90_A0A417BZ11	Phage portal protein	NA
UHGV-1491218_31	eggNOG-mapper	1408437.JNJN01000045_gene595	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1491218_31	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1491218_31	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-1491218_31	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1491218_32	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-1491218_32	UniRef90	UniRef90_A0A845MZ56	Phage terminase large subunit	NA
UHGV-1491218_32	eggNOG-mapper	1408437.JNJN01000045_gene596	TIGRFAM Phage	NA
UHGV-1491218_32	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-1491218_32	COG	COG5410	NA	NA
UHGV-1491218_32	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-1491218_33	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-1491218_33	UniRef90	UniRef90_A0A417BYR0	Helix-turn-helix domain-containing protein	NA
UHGV-1491218_33	eggNOG-mapper	1408437.JNJN01000045_gene597	HNH endonuclease	NA
UHGV-1491218_33	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-1491218_33	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-1491218_33	Structural annotation	PF07141	NA	NA
UHGV-1491218_34	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1491218_34	UniRef90	UniRef90_A0A3D3FGT2	Sigma70_r4 domain-containing protein	NA
UHGV-1491218_34	eggNOG-mapper	864563.HMPREF9166_0097	sigma factor activity	NA
UHGV-1491218_34	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1491218_34	Structural annotation	PF07374, MF_00674, TIGR02984, COG2739	NA	NA
UHGV-1491218_35	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-1491218_35	UniRef90	UniRef90_R6R5K5	Protein 64 protein	NA
UHGV-1491218_35	eggNOG-mapper	478749.BRYFOR_08526	NA	NA
UHGV-1491218_40	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1491218_40	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1491218_40	UniRef90	UniRef90_A0A417BZV5	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1491218_40	eggNOG-mapper	478749.BRYFOR_07588	endodeoxyribonuclease RusA	NA
UHGV-1491218_40	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1491218_40	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1491218_41	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-1491218_41	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1491218_41	UniRef90	UniRef90_A0A417BZN7	DNA primase	NA
UHGV-1491218_41	eggNOG-mapper	645991.Sgly_0325	Primase C terminal 2 (PriCT-2)	NA
UHGV-1491218_41	Pfam	PF08707	Primase C terminal 2 (PriCT-2)	PriCT_2
UHGV-1491218_41	Pfam	PF13481	AAA domain	AAA_25
UHGV-1491218_41	COG	COG3598	RecA-family ATPase	NA
UHGV-1491218_41	Structural annotation	PF13481, PF16793, PF08220, MF_00350, MF_00700, NF006606, NF001641, COG3598, COG3285	NA	NA
UHGV-1491218_42	KOfam	K17677	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	NA
UHGV-1491218_42	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1491218_42	UniRef90	UniRef90_A0A417BZ18	ATP-dependent helicase	NA
UHGV-1491218_42	eggNOG-mapper	1235792.C808_05388	helicase superfamily c-terminal domain	NA
UHGV-1491218_42	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-1491218_42	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-1491218_42	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1491218_42	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-1491218_42	Structural annotation	PF04851, PF16203, MF_01489, NF008521, COG1061	NA	NA
UHGV-1491218_43	PHROG	phrog_2698	NA	unknown function
UHGV-1491218_43	UniRef90	UniRef90_A0A417EYJ5	NA	NA
UHGV-1491218_43	eggNOG-mapper	742738.HMPREF9460_01355	NA	NA
UHGV-1491218_43	Structural annotation	PF05037	NA	NA
UHGV-1491218_44	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1491218_44	UniRef90	UniRef90_UPI000F633C17	ATP-binding protein	NA
UHGV-1491218_44	eggNOG-mapper	610130.Closa_1367	AAA domain	NA
UHGV-1491218_44	Pfam	PF13479	AAA domain	AAA_24
UHGV-1491218_44	Structural annotation	PF13479, MF_00268, TIGR01618, COG0468	NA	NA
UHGV-1491218_45	PHROG	phrog_1499	NA	unknown function
UHGV-1491218_45	UniRef90	UniRef90_UPI000A07922C	AAA family ATPase	NA
UHGV-1491218_45	eggNOG-mapper	641112.ACOK01000073_gene2873	domain protein	NA
UHGV-1491218_45	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1491218_47	KOfam	K13583	gcrA; GcrA cell cycle regulator	NA
UHGV-1491218_47	Pfam	PF07750	GcrA cell cycle regulator	GcrA
UHGV-1491218_47	Structural annotation	PF07750, NF040595, COG5352	NA	NA
UHGV-1491218_48	UniRef90	UniRef90_A0A396QPQ5	DNA-binding protein	NA
UHGV-1491218_48	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1491218_51	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-1491218_51	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-1491218_51	UniRef90	UniRef90_A0A417ISZ5	Helix-turn-helix domain-containing protein	NA
UHGV-1491218_51	eggNOG-mapper	1123230.ARQJ01000006_gene2611	Peptidase S24-like	NA
UHGV-1491218_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1491218_51	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-1491218_51	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1491218_51	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-1491218_52	eggNOG-mapper	1286171.EAL2_c05530	NA	NA
UHGV-1491218_53	KOfam	K14059	int; integrase	NA
UHGV-1491218_53	PHROG	phrog_1	integrase	integration and excision
UHGV-1491218_53	UniRef90	UniRef90_A0A396Q548	Site-specific integrase	NA
UHGV-1491218_53	eggNOG-mapper	1408437.JNJN01000054_gene2088	DNA integration	NA
UHGV-1491218_53	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1491218_53	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1491218_53	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1491218_53	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA