UHGV-1496947

Genome information

vOTU vOTU-020533

Genome length 43,652 bps

CDS count 66

Completeness 76.50% (medium-quality)

geNomad score 0.9813

Prediction confidence Confident

Genome information
Genome ID	UHGV-1496947
vOTU ID	vOTU-020533
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0287209
BioSample	SAMEA3182098
Country	Canada
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	76.50% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	3
Recoded stop codon	No

Viral signal
geNomad score	0.9813
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.36
Jumbo phage	No

Genome content
Genome length	43,652 bps
GC content	36.75%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	66
CDS density	85.76%
Average CDS length	569.73 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1496947_1	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-1496947_1	PHROG	phrog_4433	NA	unknown function
UHGV-1496947_1	eggNOG-mapper	886882.PPSC2_p0363	regulation of DNA-templated transcription, elongation	NA
UHGV-1496947_1	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1496947_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1496947_2	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-1496947_2	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1496947_2	UniRef90	UniRef90_A0A8D9PGW5	Chromosome partition protein	NA
UHGV-1496947_2	eggNOG-mapper	1298920.KI911353_gene2731	nuclear chromosome segregation	NA
UHGV-1496947_2	Pfam	PF13476	AAA domain	AAA_23
UHGV-1496947_2	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1496947_2	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-1496947_4	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1496947_4	PHROG	phrog_26861	NA	unknown function
UHGV-1496947_4	UniRef90	UniRef90_A0A8D9PGK1	Single strand binding protein	NA
UHGV-1496947_4	eggNOG-mapper	515620.EUBELI_01590	NA	NA
UHGV-1496947_4	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1496947_4	NCBIFam	NF004476.0	single-stranded DNA-binding protein	NA
UHGV-1496947_4	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1496947_4	Structural annotation	PF00436, PF13567, MF_00984, NF004476, COG0629	NA	NA
UHGV-1496947_5	UniRef90	UniRef90_A0A8D9UIQ5	Sporulation initiation factor	NA
UHGV-1496947_5	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-1496947_5	Structural annotation	PF08769, TIGR02875	NA	NA
UHGV-1496947_6	KOfam	K01449	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1496947_6	PHROG	phrog_14642	endolysin	lysis
UHGV-1496947_6	UniRef90	UniRef90_A0A8D9PGU7	Cell Wall Hydrolase	NA
UHGV-1496947_6	eggNOG-mapper	742733.HMPREF9469_00034	Cell Wall Hydrolase	NA
UHGV-1496947_6	Pfam	PF07486	Cell Wall Hydrolase	Hydrolase_2
UHGV-1496947_6	COG	COG3773	Cell wall hydrolase CwlJ, involved in spore germination	NA
UHGV-1496947_6	Structural annotation	PF07486, TIGR02869, COG3773	NA	NA
UHGV-1496947_7	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-1496947_7	UniRef90	UniRef90_A0A8D9PGL6	P22_AR protein	NA
UHGV-1496947_7	eggNOG-mapper	596329.HMPREF0631_1352	BRO family, N-terminal domain protein	NA
UHGV-1496947_7	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1496947_7	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-1496947_7	COG	COG3617	Prophage antirepressor	NA
UHGV-1496947_7	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-1496947_10	UniRef90	UniRef90_A0A8D9UIR6	DNA-binding transcriptional regulator	NA
UHGV-1496947_10	eggNOG-mapper	1121335.Clst_0370	NA	NA
UHGV-1496947_10	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-1496947_11	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1496947_11	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1496947_11	UniRef90	UniRef90_A0A8D9UIK2	HTH cro/C1-type domain-containing protein	NA
UHGV-1496947_11	eggNOG-mapper	445974.CLORAM_02966	Helix-turn-helix XRE-family like proteins	NA
UHGV-1496947_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1496947_11	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1496947_11	Structural annotation	PF13560, NF041951, COG3655	NA	NA
UHGV-1496947_13	KOfam	K07273	acm; lysozyme	NA
UHGV-1496947_13	PHROG	phrog_291	endolysin	lysis
UHGV-1496947_13	UniRef90	UniRef90_A0A8D9UIP9	Lysozyme	NA
UHGV-1496947_13	eggNOG-mapper	411470.RUMGNA_00451	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	NA
UHGV-1496947_13	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1496947_13	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-1496947_13	Structural annotation	PF01183, NF007404, COG3757	NA	NA
UHGV-1496947_15	PHROG	phrog_2566	NA	unknown function
UHGV-1496947_16	PHROG	phrog_16267	NA	unknown function
UHGV-1496947_16	UniRef90	UniRef90_A0A8D9PGP3	Minor structural protein	NA
UHGV-1496947_16	eggNOG-mapper	1294142.CINTURNW_1706	Phage minor structural protein	NA
UHGV-1496947_16	COG	COG4926	Phage-related protein	NA
UHGV-1496947_16	Structural annotation	PF16466, NF033848, COG3500	NA	NA
UHGV-1496947_17	PHROG	phrog_1401	NA	unknown function
UHGV-1496947_17	Structural annotation	PF07761	NA	NA
UHGV-1496947_18	PHROG	phrog_1194	NA	unknown function
UHGV-1496947_18	eggNOG-mapper	1232453.BAIF02000058_gene1638	NA	NA
UHGV-1496947_18	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1496947_19	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-1496947_19	UniRef90	UniRef90_A0A8D9PG17	Prophage antirepressor	NA
UHGV-1496947_19	eggNOG-mapper	658655.HMPREF0988_00912	Phage antirepressor protein KilAC domain	NA
UHGV-1496947_19	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1496947_19	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1496947_19	COG	COG3617	Prophage antirepressor	NA
UHGV-1496947_19	Structural annotation	PF03374, PF02498, COG3645	NA	NA
UHGV-1496947_20	Structural annotation	PF07875	NA	NA
UHGV-1496947_21	UniRef90	UniRef90_UPI00174DD543	CopG family transcriptional regulator	NA
UHGV-1496947_21	Structural annotation	PF01402, NF041793, COG4710	NA	NA
UHGV-1496947_22	UniRef90	UniRef90_A0A8D9UIV6	RNAse domain protein	NA
UHGV-1496947_23	UniRef90	UniRef90_A0A8D9UIY0	NA	NA
UHGV-1496947_23	eggNOG-mapper	1121115.AXVN01000171_gene912	NA	NA
UHGV-1496947_23	Pfam	PF16729	NA	DUF5067
UHGV-1496947_23	Structural annotation	PF16729, TIGR04087, COG3353	NA	NA
UHGV-1496947_24	PHROG	phrog_28918	NA	unknown function
UHGV-1496947_24	UniRef90	UniRef90_A0A2H4J4V9	Putative Tmp	NA
UHGV-1496947_24	eggNOG-mapper	1298920.KI911353_gene2649	tape measure	NA
UHGV-1496947_24	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1496947_26	PHROG	phrog_36112	NA	unknown function
UHGV-1496947_26	UniRef90	UniRef90_A0A8D9PG71	Tail assembly chaperone protein	NA
UHGV-1496947_26	eggNOG-mapper	1298920.KI911353_gene2651	NA	NA
UHGV-1496947_26	Structural annotation	PF16478	NA	NA
UHGV-1496947_28	UniRef90	UniRef90_A0A8D9PGN2	Major tail protein	NA
UHGV-1496947_28	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-1496947_29	Structural annotation	PF05657	NA	NA
UHGV-1496947_30	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-1496947_30	AcrCatalog	cluster_24841	NA	NA
UHGV-1496947_31	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-1496947_31	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1496947_32	PHROG	phrog_1129	holin	lysis
UHGV-1496947_32	UniRef90	UniRef90_A0A8D9UII9	Holin	NA
UHGV-1496947_32	eggNOG-mapper	411461.DORFOR_00721	NA	NA
UHGV-1496947_32	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1496947_32	Structural annotation	PF06946	NA	NA
UHGV-1496947_33	PHROG	phrog_1863	NA	unknown function
UHGV-1496947_33	eggNOG-mapper	1232452.BAIB02000007_gene1606	NA	NA
UHGV-1496947_34	eggNOG-mapper	397290.C810_01402	NA	NA
UHGV-1496947_35	UniRef90	UniRef90_A0A8D9UIY7	Rho termination factor	NA
UHGV-1496947_35	Structural annotation	PF21169	NA	NA
UHGV-1496947_36	PHROG	phrog_544	major head protein	head and packaging
UHGV-1496947_36	UniRef90	UniRef90_A0A8D9PGL1	Major capsid protein	NA
UHGV-1496947_36	eggNOG-mapper	608534.GCWU000341_02293	NA	NA
UHGV-1496947_36	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-1496947_36	Structural annotation	PF05065, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1496947_38	PHROG	phrog_64	portal protein	head and packaging
UHGV-1496947_38	UniRef90	UniRef90_A0A8D9PG58	Portal protein	NA
UHGV-1496947_38	eggNOG-mapper	397290.C810_01397	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1496947_38	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1496947_38	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1496947_39	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1496947_39	UniRef90	UniRef90_A0A352SH29	RNA polymerase subunit sigma-70 (Fragment)	NA
UHGV-1496947_39	eggNOG-mapper	97138.C820_00772	sigma factor activity	NA
UHGV-1496947_39	Pfam	PF07374	NA	DUF1492
UHGV-1496947_39	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1496947_39	Structural annotation	PF07374, MF_00674, NF008895, COG1342	NA	NA
UHGV-1496947_40	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-1496947_40	UniRef90	UniRef90_A0A8D9UIV2	Terminase	NA
UHGV-1496947_40	eggNOG-mapper	397290.C810_01390	chromosome segregation	NA
UHGV-1496947_40	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1496947_40	COG	COG5410	NA	NA
UHGV-1496947_40	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-1496947_41	PHROG	phrog_2316	NA	unknown function
UHGV-1496947_41	UniRef90	UniRef90_A0A3E4YBW5	NA	NA
UHGV-1496947_41	eggNOG-mapper	1280676.AUJO01000024_gene3262	NA	NA
UHGV-1496947_41	Pfam	PF16475	NA	DUF5052
UHGV-1496947_41	Structural annotation	PF16475, MF_00436, NF033216, COG1923	NA	NA
UHGV-1496947_44	UniRef90	UniRef90_A0A8D9PG29	Acetyl-coA carboxylase zinc finger domain protein	NA
UHGV-1496947_47	UniRef90	UniRef90_A0A8D9PGW1	HTH psq-type domain-containing protein	NA
UHGV-1496947_47	Structural annotation	PF05225, COG2886	NA	NA
UHGV-1496947_48	PHROG	phrog_22444	NA	unknown function
UHGV-1496947_48	UniRef90	UniRef90_UPI001CC2634F	helix-turn-helix domain-containing protein	NA
UHGV-1496947_48	eggNOG-mapper	1121422.AUMW01000042_gene1260	DnaD domain protein	NA
UHGV-1496947_48	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1496947_48	Structural annotation	PF07106, NF040642, COG3355	NA	NA
UHGV-1496947_50	PHROG	phrog_236	nucleotide kinase	other
UHGV-1496947_50	UniRef90	UniRef90_A0A8D9PGN7	Nucelotide kinase	NA
UHGV-1496947_50	eggNOG-mapper	1123263.AUKY01000015_gene1590	NA	NA
UHGV-1496947_50	Pfam	PF11753	NA	DUF3310
UHGV-1496947_50	Structural annotation	PF11753	NA	NA
UHGV-1496947_51	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-1496947_51	UniRef90	UniRef90_R6C0D1	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-1496947_51	eggNOG-mapper	428125.CLOLEP_01391	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-1496947_51	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-1496947_51	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-1496947_51	Structural annotation	PF03819, MF_01020, NF001613, COG0140	NA	NA
UHGV-1496947_52	UniRef90	UniRef90_A0A8D9UIS5	DNA-packaging protein	NA
UHGV-1496947_52	eggNOG-mapper	658655.HMPREF0988_00895	NA	NA
UHGV-1496947_55	eggNOG-mapper	658655.HMPREF0988_00903	NA	NA
UHGV-1496947_58	PHROG	phrog_99	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1496947_58	UniRef90	UniRef90_A0A8D9UIN0	Ethylene-responsive transcription factor	NA
UHGV-1496947_58	eggNOG-mapper	927704.SELR_12480	NA	NA
UHGV-1496947_58	Structural annotation	PF18337, PF00847	NA	NA
UHGV-1496947_59	KOfam	K19090	cas5t; CRISPR-associated protein Cas5t	NA
UHGV-1496947_59	UniRef90	UniRef90_UPI0015707911	CRISPR-associated protein Cas5	NA
UHGV-1496947_59	eggNOG-mapper	1128398.Curi_c06220	CRISPR-associated protein (Cas_Cas5)	NA
UHGV-1496947_59	PADLOC	cas_Cas5t	CRISPR-associated protein Cas5, subtype I-B/TNEAP	CRISPR-CAS
UHGV-1496947_59	COG	COG1688	CRISPR/Cas system-associated protein Cas5, RAMP superfamily	NA
UHGV-1496947_59	Structural annotation	PF09704, TIGR01895, COG1688	NA	NA
UHGV-1496947_61	PHROG	phrog_1233	NA	unknown function
UHGV-1496947_61	UniRef90	UniRef90_A0A345BPX6	Metal-dependent hydrolase	NA
UHGV-1496947_61	eggNOG-mapper	658655.HMPREF0988_00914	NA	NA
UHGV-1496947_62	eggNOG-mapper	658655.HMPREF0988_00915	NA	NA
UHGV-1496947_63	PHROG	phrog_20016	NA	unknown function
UHGV-1496947_63	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1496947_63	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-1496947_63	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1496947_64	PHROG	phrog_16490	NA	unknown function
UHGV-1496947_64	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-1496947_65	eggNOG-mapper	658655.HMPREF0988_00918	NA	NA