UHGV-1502121

Genome information

Genome length 35,119 bps

CDS count 55

Completeness 93.39% (high-quality)

geNomad score 0.9645

Prediction confidence Confident

Genome information
Genome ID	UHGV-1502121
vOTU ID	vOTU-063667
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0239277
BioSample	NA
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.39% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	2
Recoded stop codon	No

Viral signal
geNomad score	0.9645
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.37
Jumbo phage	No

Genome content
Genome length	35,119 bps
GC content	68.49%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	55
CDS density	90.18%
Average CDS length	579.11 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1502121_1	UniRef90	UniRef90_A0A3G9K6X4	Flg_new_2 domain-containing protein	NA
UHGV-1502121_1	eggNOG-mapper	511051.CSE_00210	amino acid activation for nonribosomal peptide biosynthetic process	NA
UHGV-1502121_1	COG	COG1520	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	NA
UHGV-1502121_4	KOfam	K19689	ampS, pepS, ampT; aminopeptidase [EC:3.4.11.-]	NA
UHGV-1502121_4	UniRef90	UniRef90_A0A3G9K060	Aminopeptidase PepS	NA
UHGV-1502121_4	eggNOG-mapper	1504822.CCNO01000008_gene2076	aminopeptidase activity	NA
UHGV-1502121_4	Pfam	PF02073	Thermophilic metalloprotease (M29)	Peptidase_M29
UHGV-1502121_4	COG	COG2309	Leucyl aminopeptidase (aminopeptidase T)	NA
UHGV-1502121_6	PHROG	phrog_489	endolysin	lysis
UHGV-1502121_6	UniRef90	UniRef90_A0A3G9K599	SH3b domain-containing protein	NA
UHGV-1502121_6	eggNOG-mapper	1504822.CCNO01000015_gene628	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-1502121_6	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1502121_6	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1502121_6	Structural annotation	PF01520, PF08460, MF_00417, TIGR02883, COG0860, COG4991	NA	NA
UHGV-1502121_7	PHROG	phrog_443	holin	lysis
UHGV-1502121_7	UniRef90	UniRef90_UPI00096A4162	holin	NA
UHGV-1502121_7	eggNOG-mapper	1123263.AUKY01000015_gene1627	Putative lactococcus lactis phage r1t holin	NA
UHGV-1502121_7	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1502121_8	PHROG	phrog_4105	NA	unknown function
UHGV-1502121_8	eggNOG-mapper	218140.BPSY_0948	NA	NA
UHGV-1502121_9	KOfam	K14059	int; integrase	NA
UHGV-1502121_9	PHROG	phrog_1	integrase	integration and excision
UHGV-1502121_9	UniRef90	UniRef90_A0A3G9JWP5	Integrase	NA
UHGV-1502121_9	eggNOG-mapper	1504822.CCNO01000016_gene275	DNA integration	NA
UHGV-1502121_9	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1502121_9	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1502121_9	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1502121_9	Structural annotation	PF00589, MF_01807, TIGR02224, COG4974	NA	NA
UHGV-1502121_14	PHROG	phrog_13141	NA	unknown function
UHGV-1502121_14	UniRef90	UniRef90_A0A087E4D0	Phage-related putative tail protein	NA
UHGV-1502121_14	eggNOG-mapper	1680.BADO_1228	NA	NA
UHGV-1502121_14	Structural annotation	PF20747	NA	NA
UHGV-1502121_15	PHROG	phrog_28750	NA	unknown function
UHGV-1502121_16	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-1502121_16	PHROG	phrog_6320	tail fiber protein	tail
UHGV-1502121_16	eggNOG-mapper	1391647.AVSV01000045_gene1236	cellulase activity	NA
UHGV-1502121_16	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1502121_16	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-1502121_17	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-1502121_17	PHROG	phrog_538	minor tail protein	tail
UHGV-1502121_17	UniRef90	UniRef90_A0A0B5BKN7	Phage head fiber protein	NA
UHGV-1502121_17	eggNOG-mapper	78345.BMERY_0868	NA	NA
UHGV-1502121_17	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1502121_17	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1502121_17	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-1502121_18	UniRef90	UniRef90_A0A087E4D3	Phage tail protein	NA
UHGV-1502121_18	eggNOG-mapper	78345.BMERY_0869	NA	NA
UHGV-1502121_18	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1502121_19	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1502121_19	eggNOG-mapper	1111121.HMPREF1247_0787	nuclear chromosome segregation	NA
UHGV-1502121_19	COG	COG5412	Phage-related protein	NA
UHGV-1502121_22	PHROG	phrog_885	major tail protein	tail
UHGV-1502121_22	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1502121_22	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-1502121_22	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1502121_23	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-1502121_23	Structural annotation	PF20765	NA	NA
UHGV-1502121_24	PHROG	phrog_17977	NA	unknown function
UHGV-1502121_24	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-1502121_24	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1502121_26	PHROG	phrog_212	major head protein	head and packaging
UHGV-1502121_26	UniRef90	UniRef90_A0A8J6JGV9	Phage capsid protein	NA
UHGV-1502121_26	eggNOG-mapper	935836.JAEL01000021_gene1494	NA	NA
UHGV-1502121_26	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-1502121_27	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1502121_27	UniRef90	UniRef90_A0A174AAF6	Clp R domain-containing protein	NA
UHGV-1502121_27	Structural annotation	PF06810	NA	NA
UHGV-1502121_28	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1502121_28	UniRef90	UniRef90_A0A6A8M6L6	HK97 gp10 family phage protein	NA
UHGV-1502121_28	eggNOG-mapper	1504822.CCNO01000013_gene284	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1502121_28	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1502121_28	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1502121_28	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-1502121_29	PHROG	phrog_21498	NA	unknown function
UHGV-1502121_29	UniRef90	UniRef90_F0NXT0	ParB-like nuclease	NA
UHGV-1502121_29	eggNOG-mapper	1121866.AUGK01000014_gene2036	DNA binding	NA
UHGV-1502121_29	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1502121_29	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-1502121_30	PHROG	phrog_2662	portal protein	head and packaging
UHGV-1502121_30	UniRef90	UniRef90_A0A415JID1	Phage_Mu_F domain-containing protein	NA
UHGV-1502121_30	eggNOG-mapper	1111135.HMPREF1248_0663	cell adhesion	NA
UHGV-1502121_30	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1502121_30	COG	COG2369	NA	NA
UHGV-1502121_30	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1502121_31	PHROG	phrog_64	portal protein	head and packaging
UHGV-1502121_31	UniRef90	UniRef90_A0A174A8R0	Phage portal protein, SPP1 family	NA
UHGV-1502121_31	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1502121_31	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1502121_32	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1502121_32	PHROG	phrog_10250	NA	unknown function
UHGV-1502121_32	UniRef90	UniRef90_A0A7H4KMV0	Terminase-like family protein	NA
UHGV-1502121_32	eggNOG-mapper	1504822.CCNO01000013_gene288	DNA packaging	NA
UHGV-1502121_32	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1502121_32	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1502121_32	COG	COG1783	Phage terminase large subunit	NA
UHGV-1502121_32	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1502121_33	PHROG	phrog_4102	terminase small subunit	head and packaging
UHGV-1502121_33	UniRef90	UniRef90_UPI0013662E3C	helix-turn-helix domain-containing protein	NA
UHGV-1502121_33	eggNOG-mapper	1232436.CAPF01000009_gene1763	NA	NA
UHGV-1502121_33	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-1502121_33	Structural annotation	PF02796	NA	NA
UHGV-1502121_35	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-1502121_35	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-1502121_35	UniRef90	UniRef90_UPI001E3E2DB2	dUTP diphosphatase	NA
UHGV-1502121_35	eggNOG-mapper	445975.COLSTE_02170	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-1502121_35	Pfam	PF00692	dUTPase	dUTPase
UHGV-1502121_35	NCBIFam	NF001862.0	dUTP diphosphatase	NA
UHGV-1502121_35	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-1502121_35	Structural annotation	PF00692, MF_00116, NF001862, COG0756	NA	NA
UHGV-1502121_39	KOfam	K06940	NA	NA
UHGV-1502121_39	PHROG	phrog_32498	NA	unknown function
UHGV-1502121_39	UniRef90	UniRef90_A0A396CF78	YkgJ family cysteine cluster protein	NA
UHGV-1502121_39	eggNOG-mapper	476272.RUMHYD_03327	Putative zinc- or iron-chelating domain	NA
UHGV-1502121_39	Pfam	PF03692	Putative zinc- or iron-chelating domain	CxxCxxCC
UHGV-1502121_40	PHROG	phrog_21525	NA	unknown function
UHGV-1502121_44	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1502121_44	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1502121_44	UniRef90	UniRef90_UPI0012ABCF55	single-stranded DNA-binding protein	NA
UHGV-1502121_44	eggNOG-mapper	521095.Apar_0020	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1502121_44	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1502121_44	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1502121_44	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1502121_44	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1502121_44	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1502121_45	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1502121_45	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1502121_45	UniRef90	UniRef90_UPI0012AB4D04	ATP-binding protein	NA
UHGV-1502121_45	eggNOG-mapper	1123489.AUAN01000006_gene1693	IstB-like ATP binding protein	NA
UHGV-1502121_45	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1502121_45	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1502121_45	Structural annotation	PF01695, MF_01158, NF005992, COG1484	NA	NA
UHGV-1502121_46	PHROG	phrog_15768	NA	unknown function
UHGV-1502121_46	UniRef90	UniRef90_UPI001F11A6A8	NA	NA
UHGV-1502121_46	eggNOG-mapper	1111121.HMPREF1247_0044	NA	NA
UHGV-1502121_46	Structural annotation	PF19808	NA	NA
UHGV-1502121_48	UniRef90	UniRef90_UPI0012AC5A86	integration host factor	NA
UHGV-1502121_48	eggNOG-mapper	1429046.RR21198_2403	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits	NA
UHGV-1502121_48	NCBIFam	NF041260.1	integration host factor, actinobacterial type	NA
UHGV-1502121_48	COG	COG0099	Ribosomal protein S13	NA
UHGV-1502121_48	Structural annotation	PF00416, MF_01315, NF041260, COG0099	NA	NA
UHGV-1502121_49	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1502121_49	UniRef90	UniRef90_UPI0012AC218C	phage recombination protein Bet	NA
UHGV-1502121_49	eggNOG-mapper	469378.Ccur_02960	RecT family	NA
UHGV-1502121_49	Pfam	PF03837	RecT family	RecT
UHGV-1502121_49	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-1502121_49	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1502121_49	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-1502121_50	PHROG	phrog_34396	NA	unknown function
UHGV-1502121_50	UniRef90	UniRef90_UPI0009355547	NA	NA
UHGV-1502121_50	eggNOG-mapper	742722.HMPREF9463_00201	NA	NA
UHGV-1502121_50	Pfam	PF07083	NA	DUF1351
UHGV-1502121_50	Structural annotation	PF07083	NA	NA
UHGV-1502121_51	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1502121_51	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1502121_51	UniRef90	UniRef90_UPI0009323E96	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1502121_51	eggNOG-mapper	1504822.CCNO01000013_gene309	crossover junction endodeoxyribonuclease activity	NA
UHGV-1502121_51	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1502121_51	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1502121_51	Structural annotation	PF05866, NF007305, COG4570	NA	NA