UHGV-1509274

Genome information

vOTU vOTU-020835

Genome length 32,598 bps

CDS count 51

Completeness 72.32% (medium-quality)

geNomad score 0.9764

Prediction confidence Confident

Genome information
Genome ID	UHGV-1509274
vOTU ID	vOTU-020835
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0302520
BioSample	SAMEA2738004
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	72.32% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9764
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.93
Jumbo phage	No

Genome content
Genome length	32,598 bps
GC content	56.73%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	51
CDS density	91.72%
Average CDS length	591.00 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1509274_1	eggNOG-mapper	1435051.BMOU_0764	nuclear chromosome segregation	NA
UHGV-1509274_1	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1509274_2	PHROG	phrog_1885	minor tail protein	tail
UHGV-1509274_2	UniRef90	UniRef90_A0A087B699	Putative major tail protein	NA
UHGV-1509274_2	eggNOG-mapper	1435051.BMOU_0765	NA	NA
UHGV-1509274_2	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-1509274_3	PHROG	phrog_3398	virion structural protein	head and packaging
UHGV-1509274_3	UniRef90	UniRef90_A0A087B698	Putative phage protein gp45	NA
UHGV-1509274_3	eggNOG-mapper	1435051.BMOU_0766	NA	NA
UHGV-1509274_3	Structural annotation	PF05475, NF033147, COG4935	NA	NA
UHGV-1509274_4	PHROG	phrog_5577	minor tail protein	tail
UHGV-1509274_4	UniRef90	UniRef90_W4N9I3	Phage tail domain protein	NA
UHGV-1509274_4	eggNOG-mapper	1435051.BMOU_0767	NA	NA
UHGV-1509274_4	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-1509274_5	PHROG	phrog_5448	tail length tape measure protein	tail
UHGV-1509274_5	UniRef90	UniRef90_A0A1X3A9R3	Cell surface protein	NA
UHGV-1509274_5	eggNOG-mapper	1435051.BMOU_0768	phage tail tape measure protein	NA
UHGV-1509274_5	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1509274_5	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1509274_5	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1509274_5	COG	COG0840	Methyl-accepting chemotaxis protein (MCP)	NA
UHGV-1509274_5	Structural annotation	PF20155, PF09486, TIGR02971, COG3953, COG3941, COG1579	NA	NA
UHGV-1509274_6	eggNOG-mapper	1435051.BMOU_0770	NA	NA
UHGV-1509274_7	PHROG	phrog_5010	tail assembly chaperone	tail
UHGV-1509274_7	eggNOG-mapper	1435051.BMOU_0771	NA	NA
UHGV-1509274_8	PHROG	phrog_476	major tail protein	tail
UHGV-1509274_8	UniRef90	UniRef90_A0A087DI33	Major tail subunit	NA
UHGV-1509274_8	eggNOG-mapper	1435051.BMOU_0772	NA	NA
UHGV-1509274_8	Structural annotation	PF09393, TIGR01603, COG3498	NA	NA
UHGV-1509274_9	eggNOG-mapper	1435051.BMOU_0773	NA	NA
UHGV-1509274_9	Structural annotation	PF16807, NF040576, COG3167	NA	NA
UHGV-1509274_10	eggNOG-mapper	1435051.BMOU_0774	NA	NA
UHGV-1509274_10	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-1509274_11	eggNOG-mapper	1435051.BMOU_0775	NA	NA
UHGV-1509274_12	PHROG	phrog_442	head-tail adaptor	connector
UHGV-1509274_12	UniRef90	UniRef90_W4N9G5	Mobile element protein	NA
UHGV-1509274_12	eggNOG-mapper	1435051.BMOU_0776	NA	NA
UHGV-1509274_13	KOfam	K06904	NA	NA
UHGV-1509274_13	PHROG	phrog_3244	head maturation protease	head and packaging
UHGV-1509274_13	UniRef90	UniRef90_W4N9C2	Phage major capsid protein	NA
UHGV-1509274_13	eggNOG-mapper	1435051.BMOU_0777	Phage capsid family	NA
UHGV-1509274_13	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1509274_13	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1509274_13	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1509274_13	COG	COG3740	Phage head maturation protease	NA
UHGV-1509274_14	PHROG	phrog_12	portal protein	head and packaging
UHGV-1509274_14	UniRef90	UniRef90_W4N9J1	PE-PGRS family protein	NA
UHGV-1509274_14	eggNOG-mapper	1435051.BMOU_0778	Phage portal protein	NA
UHGV-1509274_14	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1509274_14	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1509274_14	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1509274_16	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1509274_16	UniRef90	UniRef90_W4NAK9	Terminase	NA
UHGV-1509274_16	eggNOG-mapper	1435051.BMOU_0780	Phage Terminase	NA
UHGV-1509274_16	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1509274_16	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1509274_16	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1509274_16	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1509274_17	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1509274_17	UniRef90	UniRef90_A0A1X3A9X3	Terminase	NA
UHGV-1509274_17	eggNOG-mapper	158787.BSCA_1010	Phage terminase, small subunit	NA
UHGV-1509274_17	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1509274_17	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1509274_17	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1509274_17	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1509274_18	eggNOG-mapper	158787.BSCA_1012	NA	NA
UHGV-1509274_19	PHROG	phrog_908	NA	unknown function
UHGV-1509274_19	UniRef90	UniRef90_UPI001F29D6CA	PhnA protein	NA
UHGV-1509274_19	eggNOG-mapper	78346.BRUM_0402	NA	NA
UHGV-1509274_19	Structural annotation	COG0789	NA	NA
UHGV-1509274_25	UniRef90	UniRef90_UPI001076266F	transposase	NA
UHGV-1509274_25	eggNOG-mapper	1435051.BMOU_0784	NA	NA
UHGV-1509274_25	Structural annotation	PF01815	NA	NA
UHGV-1509274_26	PHROG	phrog_2447	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1509274_26	eggNOG-mapper	1435051.BMOU_0785	NA	NA
UHGV-1509274_26	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-1509274_27	PHROG	phrog_111	DNA methyltransferase	other
UHGV-1509274_27	UniRef90	UniRef90_UPI0018C25D64	adenine methyltransferase	NA
UHGV-1509274_27	eggNOG-mapper	1384484.AEQU_0050	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-1509274_27	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-1509274_27	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-1509274_27	Structural annotation	PF05869, TIGR01712, COG0338	NA	NA
UHGV-1509274_31	eggNOG-mapper	411459.RUMOBE_01111	NA	NA
UHGV-1509274_33	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1509274_33	UniRef90	UniRef90_W4N9I2	Gp86	NA
UHGV-1509274_33	eggNOG-mapper	1435051.BMOU_0792	NA	NA
UHGV-1509274_33	Structural annotation	PF13588, COG1591	NA	NA
UHGV-1509274_34	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1509274_34	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1509274_34	UniRef90	UniRef90_UPI001075F129	single-stranded DNA-binding protein	NA
UHGV-1509274_34	eggNOG-mapper	1435051.BMOU_0793	Single-strand binding protein family	NA
UHGV-1509274_34	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1509274_34	NCBIFam	NF005851.0	single-stranded DNA-binding protein	NA
UHGV-1509274_34	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1509274_34	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1509274_34	Structural annotation	PF00436, MF_00984, NF005851, COG2965	NA	NA
UHGV-1509274_35	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1509274_35	UniRef90	UniRef90_UPI00123B0CBF	recombinase RecT	NA
UHGV-1509274_35	eggNOG-mapper	78346.BRUM_0410	NA	NA
UHGV-1509274_36	eggNOG-mapper	1435051.BMOU_0795	NA	NA
UHGV-1509274_37	PHROG	phrog_954	DNA methyltransferase	other
UHGV-1509274_37	UniRef90	UniRef90_A0A2R4G2L6	Class I SAM-dependent methyltransferase	NA
UHGV-1509274_37	eggNOG-mapper	104623.Ser39006_02605	methyltransferase	NA
UHGV-1509274_37	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-1509274_37	Pfam	PF08241	Methyltransferase domain	Methyltransf_11
UHGV-1509274_37	COG	COG0500	SAM-dependent methyltransferase	NA
UHGV-1509274_37	Structural annotation	PF01170, MF_01057, TIGR00446, COG4123	NA	NA
UHGV-1509274_40	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1509274_40	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-1509274_40	UniRef90	UniRef90_A0A412K8X8	Phage antirepressor Ant	NA
UHGV-1509274_40	eggNOG-mapper	702459.BBPR_0883	BRO family, N-terminal domain	NA
UHGV-1509274_40	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1509274_40	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1509274_40	COG	COG3617	Prophage antirepressor	NA
UHGV-1509274_40	Structural annotation	PF03374, PF02498, COG3645, COG3617	NA	NA
UHGV-1509274_44	UniRef90	UniRef90_UPI0010F9FB23	Lar family restriction alleviation protein	NA
UHGV-1509274_46	UniRef90	UniRef90_UPI000D78BA09	helix-turn-helix transcriptional regulator	NA
UHGV-1509274_46	eggNOG-mapper	1687.BCOR_0992	NA	NA
UHGV-1509274_46	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-1509274_47	UniRef90	UniRef90_UPI00107675BE	helix-turn-helix domain-containing protein	NA
UHGV-1509274_47	eggNOG-mapper	1435051.BMOU_0746	NA	NA
UHGV-1509274_47	Pfam	PF08667	BetR domain	BetR
UHGV-1509274_48	PHROG	phrog_87	metallo-protease	other
UHGV-1509274_48	UniRef90	UniRef90_UPI0010769C62	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-1509274_48	eggNOG-mapper	1435051.BMOU_0747	NA	NA
UHGV-1509274_48	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1509274_49	UniRef90	UniRef90_W4NAH9	Peptidoglycan associated protein	NA
UHGV-1509274_49	eggNOG-mapper	1435051.BMOU_0748	serine threonine protein kinase	NA
UHGV-1509274_49	COG	COG2815	PASTA domain, binds beta-lactams	NA
UHGV-1509274_50	eggNOG-mapper	1435051.BMOU_0749	NA	NA
UHGV-1509274_51	PHROG	phrog_11747	NA	unknown function
UHGV-1509274_51	UniRef90	UniRef90_UPI00107653C7	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1509274_51	eggNOG-mapper	767029.HMPREF9154_0453	NA	NA
UHGV-1509274_51	Pfam	PF01972	Serine dehydrogenase proteinase	SDH_sah
UHGV-1509274_51	COG	COG1030	Membrane-bound serine protease NfeD, ClpP class	NA