UHGV-1518646

Genome information

vOTU vOTU-020150

Genome length 36,234 bps

CDS count 61

Completeness 58.58% (medium-quality)

geNomad score 0.9798

Prediction confidence Confident

Genome information
Genome ID	UHGV-1518646
vOTU ID	vOTU-020150
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0317329
BioSample	SAMN00990321
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	58.58% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	26
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9798
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.55
Jumbo phage	No

Genome content
Genome length	36,234 bps
GC content	42.78%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	61
CDS density	95.10%
Average CDS length	569.31 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1518646_2	PHROG	phrog_587	structural protein	head and packaging
UHGV-1518646_2	UniRef90	UniRef90_UPI001E4228BA	NA	NA
UHGV-1518646_2	eggNOG-mapper	1120985.AUMI01000001_gene2157	NA	NA
UHGV-1518646_2	Pfam	PF11041	NA	DUF2612
UHGV-1518646_2	Structural annotation	PF11041, TIGR02242, COG3948	NA	NA
UHGV-1518646_3	PHROG	phrog_6	baseplate protein	tail
UHGV-1518646_3	UniRef90	UniRef90_A0A346B181	Baseplate_J domain-containing protein	NA
UHGV-1518646_3	eggNOG-mapper	1120985.AUMI01000001_gene2158	Baseplate J-like protein	NA
UHGV-1518646_3	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-1518646_3	COG	COG3299	NA	NA
UHGV-1518646_3	Structural annotation	PF03434, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-1518646_4	PHROG	phrog_120	baseplate protein	tail
UHGV-1518646_4	UniRef90	UniRef90_W0I0B3	NA	NA
UHGV-1518646_4	eggNOG-mapper	1120985.AUMI01000001_gene2159	NA	NA
UHGV-1518646_4	Structural annotation	TIGR03357, COG3628	NA	NA
UHGV-1518646_5	UniRef90	UniRef90_A0A346B179	Gp138_N domain-containing protein	NA
UHGV-1518646_5	eggNOG-mapper	1120985.AUMI01000001_gene2160	Baseplate assembly protein	NA
UHGV-1518646_5	Pfam	PF18352	NA	Gp138_N
UHGV-1518646_5	Pfam	PF18946	GpV Apex motif	Apex
UHGV-1518646_5	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-1518646_5	Structural annotation	PF18352, TIGR01644, COG4540	NA	NA
UHGV-1518646_6	PHROG	phrog_196	virion structural protein	head and packaging
UHGV-1518646_6	eggNOG-mapper	1120985.AUMI01000001_gene2161	NA	NA
UHGV-1518646_6	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-1518646_7	PHROG	phrog_349	virion structural protein	head and packaging
UHGV-1518646_7	eggNOG-mapper	94624.Bpet0992	NA	NA
UHGV-1518646_7	Structural annotation	PF06531	NA	NA
UHGV-1518646_8	PHROG	phrog_817	tail fiber protein	tail
UHGV-1518646_8	eggNOG-mapper	1278971.AOGF01000014_gene1704	NA	NA
UHGV-1518646_8	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-1518646_9	PHROG	phrog_339	tail length tape measure protein	tail
UHGV-1518646_9	UniRef90	UniRef90_UPI0018C4EA13	tape measure protein	NA
UHGV-1518646_9	eggNOG-mapper	1122947.FR7_2621	tape measure	NA
UHGV-1518646_9	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1518646_9	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1518646_9	COG	COG5281	Phage-related minor tail protein	NA
UHGV-1518646_10	PHROG	phrog_1613	tail assembly chaperone	tail
UHGV-1518646_10	UniRef90	UniRef90_A0A0N9RR02	Putative tail assembly protein	NA
UHGV-1518646_10	eggNOG-mapper	1120985.AUMI01000001_gene2166	NA	NA
UHGV-1518646_10	Pfam	PF21822	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
UHGV-1518646_10	Structural annotation	PF21822	NA	NA
UHGV-1518646_11	PHROG	phrog_280	virion structural protein	head and packaging
UHGV-1518646_11	UniRef90	UniRef90_A0A346B173	NA	NA
UHGV-1518646_11	eggNOG-mapper	1120985.AUMI01000001_gene2167	NA	NA
UHGV-1518646_11	Structural annotation	PF11681, TIGR02241, COG5437	NA	NA
UHGV-1518646_12	PHROG	phrog_205	virion structural protein	head and packaging
UHGV-1518646_12	UniRef90	UniRef90_UPI0018C57847	NA	NA
UHGV-1518646_12	eggNOG-mapper	1120985.AUMI01000001_gene2168	NA	NA
UHGV-1518646_12	Pfam	PF11863	NA	DUF3383
UHGV-1518646_12	Structural annotation	PF11863, COG4386	NA	NA
UHGV-1518646_13	PHROG	phrog_7975	tail terminator	connector
UHGV-1518646_13	eggNOG-mapper	1278971.AOGF01000014_gene1711	NA	NA
UHGV-1518646_13	Structural annotation	PF08873	NA	NA
UHGV-1518646_14	PHROG	phrog_939	head protein	head and packaging
UHGV-1518646_14	eggNOG-mapper	1120985.AUMI01000019_gene2229	NA	NA
UHGV-1518646_14	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1518646_15	PHROG	phrog_222	tail protein	tail
UHGV-1518646_15	eggNOG-mapper	1120985.AUMI01000019_gene2230	NA	NA
UHGV-1518646_16	PHROG	phrog_302	virion structural protein	head and packaging
UHGV-1518646_16	UniRef90	UniRef90_UPI0018C516B4	NA	NA
UHGV-1518646_16	Pfam	PF13262	NA	DUF4054
UHGV-1518646_16	Structural annotation	PF13262	NA	NA
UHGV-1518646_17	PHROG	phrog_3281	endonuclease VII	DNA, RNA and nucleotide metabolism
UHGV-1518646_18	PHROG	phrog_264	major head protein	head and packaging
UHGV-1518646_18	UniRef90	UniRef90_A0A540VRX9	NA	NA
UHGV-1518646_18	eggNOG-mapper	1120985.AUMI01000019_gene2233	NA	NA
UHGV-1518646_18	Pfam	PF09950	NA	DUF2184
UHGV-1518646_18	COG	COG4834	NA	NA
UHGV-1518646_18	Structural annotation	PF09950, MF_04119, TIGR01554, COG4834	NA	NA
UHGV-1518646_19	PHROG	phrog_563	virion structural protein	head and packaging
UHGV-1518646_19	eggNOG-mapper	1161401.ASJA01000008_gene1661	NA	NA
UHGV-1518646_19	Structural annotation	PF11133, COG5471	NA	NA
UHGV-1518646_20	KOfam	K09960	NA	NA
UHGV-1518646_20	PHROG	phrog_530	head maturation protease	head and packaging
UHGV-1518646_20	UniRef90	UniRef90_A0A346B163	NA	NA
UHGV-1518646_20	eggNOG-mapper	1120985.AUMI01000019_gene2235	NA	NA
UHGV-1518646_20	Pfam	PF09979	NA	DUF2213
UHGV-1518646_20	COG	COG3566	NA	NA
UHGV-1518646_20	Structural annotation	PF09979, TIGR01543, COG3566	NA	NA
UHGV-1518646_22	PHROG	phrog_324	head morphogenesis	head and packaging
UHGV-1518646_22	UniRef90	UniRef90_A0A3R6VT31	Phage_Mu_F domain-containing protein	NA
UHGV-1518646_22	eggNOG-mapper	1120985.AUMI01000019_gene2236	Phage Mu protein F like protein	NA
UHGV-1518646_22	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1518646_22	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1518646_22	COG	COG2369	NA	NA
UHGV-1518646_22	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-1518646_23	KOfam	K09961	NA	NA
UHGV-1518646_23	PHROG	phrog_146	portal protein	head and packaging
UHGV-1518646_23	UniRef90	UniRef90_A0A346B160	NA	NA
UHGV-1518646_23	eggNOG-mapper	1120985.AUMI01000019_gene2237	NA	NA
UHGV-1518646_23	Pfam	PF06381	Anti-CBASS protein Acb1-like	Abc1-like
UHGV-1518646_23	NCBIFam	TIGR01555.1	phage-associated protein, HI1409 family	NA
UHGV-1518646_23	COG	COG3567	NA	NA
UHGV-1518646_23	Structural annotation	PF06381, MF_04135, TIGR01555, COG3567	NA	NA
UHGV-1518646_24	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1518646_24	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-1518646_24	UniRef90	UniRef90_A0A0J1FSP4	Terminase-like family protein	NA
UHGV-1518646_24	eggNOG-mapper	1200557.JHWV01000006_gene1732	Terminase RNaseH-like domain	NA
UHGV-1518646_24	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1518646_24	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1518646_24	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-1518646_24	COG	COG5362	Phage terminase large subunit	NA
UHGV-1518646_24	Structural annotation	PF04466, PF17289, MF_04145, TIGR01547, COG5323	NA	NA
UHGV-1518646_25	Structural annotation	PF07141	NA	NA
UHGV-1518646_26	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1518646_34	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1518646_34	PHROG	phrog_116	DNA methyltransferase	other
UHGV-1518646_34	UniRef90	UniRef90_A0A1C6GXI4	Cytosine-specific methyltransferase	NA
UHGV-1518646_34	eggNOG-mapper	1211817.CCAT010000049_gene2479	PFAM C-5 cytosine-specific DNA methylase	NA
UHGV-1518646_34	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-1518646_34	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1518646_34	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1518646_34	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1518646_38	PHROG	phrog_21026	NA	unknown function
UHGV-1518646_40	PHROG	phrog_21026	NA	unknown function
UHGV-1518646_41	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-1518646_41	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-1518646_41	UniRef90	UniRef90_R5BD00	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-1518646_41	eggNOG-mapper	66692.ABC2847	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-1518646_41	Pfam	PF00692	dUTPase	dUTPase
UHGV-1518646_41	NCBIFam	TIGR00576.1	dUTP diphosphatase	NA
UHGV-1518646_41	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-1518646_41	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-1518646_51	PHROG	phrog_21026	NA	unknown function
UHGV-1518646_52	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1518646_52	UniRef90	UniRef90_A0A841R0Q1	Holliday junction resolvase	NA
UHGV-1518646_52	eggNOG-mapper	1123250.KB908417_gene653	NA	NA
UHGV-1518646_52	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-1518646_53	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1518646_53	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1518646_53	UniRef90	UniRef90_A0A6N3AU65	Methyltransferase	NA
UHGV-1518646_53	eggNOG-mapper	411468.CLOSCI_00299	DNA methylase	NA
UHGV-1518646_53	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-1518646_53	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1518646_53	COG	COG0863	DNA modification methylase	NA
UHGV-1518646_53	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-1518646_54	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1518646_54	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1518646_54	UniRef90	UniRef90_A0A6I5ZQ10	DNA replication protein DnaC	NA
UHGV-1518646_54	eggNOG-mapper	1122939.ATUD01000006_gene1650	IstB-like ATP binding protein	NA
UHGV-1518646_54	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1518646_54	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1518646_54	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-1518646_55	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1518646_55	UniRef90	UniRef90_A0A096AL11	Replication protein DnaD	NA
UHGV-1518646_55	eggNOG-mapper	1401067.HMPREF0872_03460	NA	NA
UHGV-1518646_55	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1518646_55	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-1518646_55	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-1518646_55	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1518646_55	Structural annotation	PF14297, TIGR01446, TIGR01714	NA	NA
UHGV-1518646_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1518646_56	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1518646_56	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1518646_57	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-1518646_57	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-1518646_57	UniRef90	UniRef90_A0A6N3C161	Metallo-hydrolase YycJ	NA
UHGV-1518646_57	eggNOG-mapper	1401067.HMPREF0872_03470	COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I	NA
UHGV-1518646_57	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-1518646_57	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-1518646_57	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-1518646_58	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1518646_58	UniRef90	UniRef90_S4U0C4	RecT protein-like protein	NA
UHGV-1518646_58	eggNOG-mapper	563192.HMPREF0179_00147	NA	NA
UHGV-1518646_58	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-1518646_59	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-1518646_59	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1518646_59	UniRef90	UniRef90_UPI00177FB940	AAA family ATPase	NA
UHGV-1518646_59	eggNOG-mapper	1382358.JHVN01000024_gene1691	NA	NA
UHGV-1518646_59	Pfam	PF13476	AAA domain	AAA_23
UHGV-1518646_59	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1518646_59	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-1518646_61	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1518646_61	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA