UHGV-1527548

Genome information

vOTU vOTU-020370

Genome length 31,296 bps

CDS count 53

Completeness 77.54% (medium-quality)

geNomad score 0.9822

Prediction confidence Confident

Genome information
Genome ID	UHGV-1527548
vOTU ID	vOTU-020370
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0223411
BioSample	NA
Country	Finland
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	77.54% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9822
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.12
Jumbo phage	No

Genome content
Genome length	31,296 bps
GC content	58.32%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	53
CDS density	93.70%
Average CDS length	556.53 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1527548_1	eggNOG-mapper	1680.BADO_1228	NA	NA
UHGV-1527548_3	PHROG	phrog_538	minor tail protein	tail
UHGV-1527548_3	UniRef90	UniRef90_A0A087BHI6	Phage head fiber protein	NA
UHGV-1527548_3	eggNOG-mapper	1680.BADO_1230	NA	NA
UHGV-1527548_3	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1527548_3	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-1527548_4	UniRef90	UniRef90_A0A7Y0EUM5	Tail fiber protein	NA
UHGV-1527548_4	eggNOG-mapper	1680.BADO_1231	NA	NA
UHGV-1527548_4	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1527548_5	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-1527548_5	UniRef90	UniRef90_A0A6B8LK75	Phage tail protein	NA
UHGV-1527548_5	eggNOG-mapper	1680.BADO_1232	Phage-related minor tail protein	NA
UHGV-1527548_5	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1527548_5	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1527548_5	COG	COG5283	Phage-related tail protein	NA
UHGV-1527548_5	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-1527548_6	UniRef90	UniRef90_A0A1X2YXV5	Terminase	NA
UHGV-1527548_6	eggNOG-mapper	398513.BBNG_00857	NA	NA
UHGV-1527548_7	UniRef90	UniRef90_A0A076JN63	DNAase primase	NA
UHGV-1527548_7	eggNOG-mapper	1680.BADO_1234	NA	NA
UHGV-1527548_7	Structural annotation	PF08890	NA	NA
UHGV-1527548_8	PHROG	phrog_2491	major tail protein	tail
UHGV-1527548_8	UniRef90	UniRef90_A0A076JPN9	Gp28	NA
UHGV-1527548_8	eggNOG-mapper	1680.BADO_1235	NA	NA
UHGV-1527548_8	Structural annotation	PF16463, TIGR02241, COG3498	NA	NA
UHGV-1527548_9	UniRef90	UniRef90_A0A3E5HKK5	Transcriptional regulator	NA
UHGV-1527548_9	eggNOG-mapper	1680.BADO_1236	NA	NA
UHGV-1527548_9	Structural annotation	PF06141	NA	NA
UHGV-1527548_10	PHROG	phrog_19109	NA	unknown function
UHGV-1527548_10	eggNOG-mapper	1680.BADO_1237	NA	NA
UHGV-1527548_10	Structural annotation	TIGR01725	NA	NA
UHGV-1527548_11	PHROG	phrog_13779	NA	unknown function
UHGV-1527548_11	UniRef90	UniRef90_UPI00192840F4	NA	NA
UHGV-1527548_11	eggNOG-mapper	1680.BADO_1238	NA	NA
UHGV-1527548_11	Pfam	PF19586	NA	DUF6093
UHGV-1527548_11	Structural annotation	PF19586, TIGR01563, COG5614	NA	NA
UHGV-1527548_12	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-1527548_12	UniRef90	UniRef90_I3BBT3	Phage protein Gp19/Gp15/Gp42	NA
UHGV-1527548_12	eggNOG-mapper	1437603.BMON_0136	Phage protein Gp19/Gp15/Gp42	NA
UHGV-1527548_12	Pfam	PF09355	NA	Phage_Gp19
UHGV-1527548_12	Structural annotation	PF09355	NA	NA
UHGV-1527548_13	UniRef90	UniRef90_I3BBX9	Head fiber domain protein	NA
UHGV-1527548_14	PHROG	phrog_15682	NA	unknown function
UHGV-1527548_15	PHROG	phrog_212	major head protein	head and packaging
UHGV-1527548_15	UniRef90	UniRef90_UPI001038A13F	phage capsid protein	NA
UHGV-1527548_15	eggNOG-mapper	1437603.BMON_0137	NA	NA
UHGV-1527548_15	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-1527548_16	PHROG	phrog_1793	head scaffolding protein	head and packaging
UHGV-1527548_16	UniRef90	UniRef90_UPI001115A562	NA	NA
UHGV-1527548_16	eggNOG-mapper	1437603.BMON_0138	NA	NA
UHGV-1527548_17	PHROG	phrog_1522	head maturation protease	head and packaging
UHGV-1527548_17	UniRef90	UniRef90_A0A8A9ICF6	CdiA_C domain-containing protein	NA
UHGV-1527548_17	eggNOG-mapper	1437603.BMON_0139	NA	NA
UHGV-1527548_18	PHROG	phrog_104	portal protein	head and packaging
UHGV-1527548_18	UniRef90	UniRef90_A0A087DRQ5	Phage portal protein gp6-like protein	NA
UHGV-1527548_18	eggNOG-mapper	1437603.BMON_0140	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1527548_18	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1527548_18	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1527548_19	PHROG	phrog_19179	terminase large subunit	head and packaging
UHGV-1527548_19	UniRef90	UniRef90_A0A087CAG9	Gp22	NA
UHGV-1527548_19	eggNOG-mapper	1437603.BMON_0141	Terminase	NA
UHGV-1527548_19	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1527548_19	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1527548_20	PHROG	phrog_8680	NA	unknown function
UHGV-1527548_20	UniRef90	UniRef90_A0A087DRQ2	ParB-like protein	NA
UHGV-1527548_20	eggNOG-mapper	1680.BADO_1246	NA	NA
UHGV-1527548_20	Pfam	PF14386	NA	DUF4417
UHGV-1527548_21	PHROG	phrog_226	minor tail protein	tail
UHGV-1527548_21	eggNOG-mapper	1437603.BMON_0142	NA	NA
UHGV-1527548_22	UniRef90	UniRef90_A0A6B8LMD9	Hypoyhetical protein	NA
UHGV-1527548_23	PHROG	phrog_908	NA	unknown function
UHGV-1527548_23	UniRef90	UniRef90_UPI001EF668C6	PhnA protein	NA
UHGV-1527548_23	eggNOG-mapper	78346.BRUM_0402	NA	NA
UHGV-1527548_23	Structural annotation	COG0789	NA	NA
UHGV-1527548_24	UniRef90	UniRef90_A0A267WJ25	Antitoxin	NA
UHGV-1527548_24	eggNOG-mapper	78346.BRUM_0403	NA	NA
UHGV-1527548_26	PHROG	phrog_236	nucleotide kinase	other
UHGV-1527548_26	UniRef90	UniRef90_UPI001F0CDE20	NA	NA
UHGV-1527548_26	eggNOG-mapper	1680.BADO_1253	NA	NA
UHGV-1527548_26	Pfam	PF11753	NA	DUF3310
UHGV-1527548_28	UniRef90	UniRef90_A0A072MSY3	GTP-binding protein	NA
UHGV-1527548_29	PHROG	phrog_2447	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1527548_29	eggNOG-mapper	78346.BRUM_0405	NA	NA
UHGV-1527548_29	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-1527548_30	UniRef90	UniRef90_UPI001CFBB2F5	zinc ribbon domain-containing protein	NA
UHGV-1527548_32	eggNOG-mapper	1394176.AWUO01000011_gene389	NA	NA
UHGV-1527548_32	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-1527548_33	UniRef90	UniRef90_A0A1X2ZKC5	Transposase	NA
UHGV-1527548_33	eggNOG-mapper	78346.BRUM_0407	NA	NA
UHGV-1527548_33	Structural annotation	PF01815	NA	NA
UHGV-1527548_34	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1527548_34	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1527548_34	UniRef90	UniRef90_A0A087D540	Putative endodeoxyribonuclease RusA family protein	NA
UHGV-1527548_34	eggNOG-mapper	78346.BRUM_0408	NA	NA
UHGV-1527548_34	Structural annotation	NF007305, COG4570	NA	NA
UHGV-1527548_35	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1527548_35	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1527548_35	UniRef90	UniRef90_A0A413KAY2	Single-stranded DNA-binding protein	NA
UHGV-1527548_35	eggNOG-mapper	78346.BRUM_0409	Single-strand binding protein family	NA
UHGV-1527548_35	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1527548_35	NCBIFam	NF005851.0	single-stranded DNA-binding protein	NA
UHGV-1527548_35	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1527548_35	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1527548_35	Structural annotation	PF00436, MF_00984, NF005851, COG0629	NA	NA
UHGV-1527548_37	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1527548_37	UniRef90	UniRef90_UPI00123B0CBF	recombinase RecT	NA
UHGV-1527548_37	eggNOG-mapper	78346.BRUM_0410	NA	NA
UHGV-1527548_38	eggNOG-mapper	78346.BRUM_0411	NA	NA
UHGV-1527548_40	UniRef90	UniRef90_A0A072MRK2	Negative regulator of class I heat shock protein	NA
UHGV-1527548_40	Pfam	PF01022	Bacterial regulatory protein, arsR family	HTH_5
UHGV-1527548_40	Structural annotation	PF01047	NA	NA
UHGV-1527548_41	UniRef90	UniRef90_A0A6B8LMI6	Hypoyhetical protein	NA
UHGV-1527548_42	UniRef90	UniRef90_A0A072MSX1	HTH_17 domain-containing protein	NA
UHGV-1527548_42	eggNOG-mapper	558173.CDOO_03875	Helix-turn-helix domain	NA
UHGV-1527548_42	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1527548_42	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-1527548_43	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1527548_43	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-1527548_43	UniRef90	UniRef90_A0A2K9B8S9	Phage antirepressor protein	NA
UHGV-1527548_43	eggNOG-mapper	398513.BBNG_00818	BRO family, N-terminal domain	NA
UHGV-1527548_43	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1527548_43	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1527548_43	COG	COG3617	Prophage antirepressor	NA
UHGV-1527548_43	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-1527548_44	eggNOG-mapper	702459.BBPR_0888	NA	NA
UHGV-1527548_45	eggNOG-mapper	78346.BRUM_0417	NA	NA
UHGV-1527548_45	Structural annotation	PF12989	NA	NA
UHGV-1527548_48	PHROG	phrog_4583	transcriptional repressor	transcription regulation
UHGV-1527548_48	UniRef90	UniRef90_A0A173ZNQ3	Helix-turn-helix transcriptional regulator	NA
UHGV-1527548_48	eggNOG-mapper	1280676.AUJO01000006_gene621	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1527548_48	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1527548_48	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1527548_48	Structural annotation	PF08667, MF_00535, NF041951, COG3093	NA	NA
UHGV-1527548_49	UniRef90	UniRef90_A0A412K8S3	XRE family transcriptional regulator	NA
UHGV-1527548_49	eggNOG-mapper	702459.BBPR_0880	NA	NA
UHGV-1527548_49	Structural annotation	PF08667, MF_00535, NF041677, COG1476	NA	NA
UHGV-1527548_50	PHROG	phrog_87	metallo-protease	other
UHGV-1527548_50	UniRef90	UniRef90_UPI001CF991EA	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-1527548_50	eggNOG-mapper	1435051.BMOU_0747	NA	NA
UHGV-1527548_50	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1527548_50	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1527548_51	UniRef90	UniRef90_A0A076JPS5	Cell surface protein	NA
UHGV-1527548_51	eggNOG-mapper	78346.BRUM_0423	NA	NA
UHGV-1527548_52	PHROG	phrog_18591	NA	unknown function
UHGV-1527548_52	eggNOG-mapper	78346.BRUM_0424	NA	NA
UHGV-1527548_53	eggNOG-mapper	78346.BRUM_0425	NA	NA