UHGV-1796374

Genome information

Genome length 19,501 bps

CDS count 26

Completeness 55.08% (medium-quality)

geNomad score 0.9803

Prediction confidence Confident

Genome information
Genome ID	UHGV-1796374
vOTU ID	vOTU-036641
vOTU representative	Yes
Source dataset	MGV
Original genome ID	MGV-GENOME-0141874
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.08% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9803
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.09
Jumbo phage	No

Genome content
Genome length	19,501 bps
GC content	39.48%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	26
CDS density	96.85%
Average CDS length	729.23 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1796374_1	KOfam	K07273	acm; lysozyme	NA
UHGV-1796374_1	PHROG	phrog_291	endolysin	lysis
UHGV-1796374_1	UniRef90	UniRef90_A0A415FKY5	Glycoside hydrolase (Fragment)	NA
UHGV-1796374_1	eggNOG-mapper	1158614.I592_00641	Glycosyl hydrolases family 25	NA
UHGV-1796374_1	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1796374_1	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-1796374_2	PHROG	phrog_20258	NA	unknown function
UHGV-1796374_2	eggNOG-mapper	929506.CbC4_0850	NA	NA
UHGV-1796374_4	PHROG	phrog_372	tail protein	tail
UHGV-1796374_4	eggNOG-mapper	428127.EUBDOL_01566	domain, Protein	NA
UHGV-1796374_4	COG	COG3210	Large exoprotein involved in heme utilization or adhesion	NA
UHGV-1796374_4	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-1796374_5	PHROG	phrog_6616	tail protein	tail
UHGV-1796374_5	eggNOG-mapper	1123263.AUKY01000051_gene1069	cellulase activity	NA
UHGV-1796374_5	COG	COG4926	Phage-related protein	NA
UHGV-1796374_5	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-1796374_6	PHROG	phrog_1194	NA	unknown function
UHGV-1796374_6	eggNOG-mapper	1123263.AUKY01000051_gene1070	NA	NA
UHGV-1796374_6	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1796374_7	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1796374_7	UniRef90	UniRef90_A0A1C5TVU6	Phage-related minor tail protein	NA
UHGV-1796374_7	eggNOG-mapper	1123263.AUKY01000051_gene1071	tape measure	NA
UHGV-1796374_7	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1796374_7	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1796374_8	PHROG	phrog_8355	NA	unknown function
UHGV-1796374_8	UniRef90	UniRef90_UPI001F170E6A	Gp15 family bacteriophage protein	NA
UHGV-1796374_8	eggNOG-mapper	1123263.AUKY01000051_gene1072	NA	NA
UHGV-1796374_8	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1796374_8	Structural annotation	PF06854	NA	NA
UHGV-1796374_9	PHROG	phrog_8300	NA	unknown function
UHGV-1796374_9	eggNOG-mapper	1123263.AUKY01000051_gene1073	NA	NA
UHGV-1796374_9	Structural annotation	PF06896	NA	NA
UHGV-1796374_10	PHROG	phrog_820	major tail protein	tail
UHGV-1796374_10	eggNOG-mapper	1123263.AUKY01000051_gene1074	NA	NA
UHGV-1796374_10	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1796374_11	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-1796374_11	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-1796374_11	eggNOG-mapper	1123263.AUKY01000051_gene1075	NA	NA
UHGV-1796374_11	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1796374_11	Structural annotation	PF12691, COG5003	NA	NA
UHGV-1796374_12	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1796374_12	eggNOG-mapper	1123263.AUKY01000051_gene1076	NA	NA
UHGV-1796374_13	PHROG	phrog_8710	NA	unknown function
UHGV-1796374_13	eggNOG-mapper	1123263.AUKY01000051_gene1077	NA	NA
UHGV-1796374_13	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1796374_14	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1796374_14	eggNOG-mapper	1123263.AUKY01000051_gene1078	NA	NA
UHGV-1796374_15	eggNOG-mapper	1123263.AUKY01000051_gene1079	NA	NA
UHGV-1796374_16	PHROG	phrog_422	major head protein	head and packaging
UHGV-1796374_16	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-1796374_16	eggNOG-mapper	1123263.AUKY01000051_gene1080	NA	NA
UHGV-1796374_16	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1796374_17	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1796374_17	eggNOG-mapper	1123263.AUKY01000051_gene1081	NA	NA
UHGV-1796374_20	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1796374_20	UniRef90	UniRef90_UPI001D0157A8	phage minor capsid protein	NA
UHGV-1796374_20	eggNOG-mapper	679192.HMPREF9013_1305	Phage minor capsid protein 2	NA
UHGV-1796374_20	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1796374_20	Structural annotation	PF06152	NA	NA
UHGV-1796374_21	PHROG	phrog_533	portal protein	head and packaging
UHGV-1796374_21	UniRef90	UniRef90_UPI001D011A41	capsid protein	NA
UHGV-1796374_21	eggNOG-mapper	1123263.AUKY01000111_gene1094	NA	NA
UHGV-1796374_21	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1796374_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1796374_22	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1796374_22	UniRef90	UniRef90_D2MPJ1	Phage terminase, large subunit, PBSX family	NA
UHGV-1796374_22	eggNOG-mapper	1123263.AUKY01000111_gene1093	Phage terminase, large subunit, PBSX family	NA
UHGV-1796374_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-1796374_22	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1796374_23	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1796374_23	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1796374_23	UniRef90	UniRef90_UPI00138B0CFF	terminase small subunit	NA
UHGV-1796374_23	eggNOG-mapper	1123263.AUKY01000111_gene1092	DNA packaging	NA
UHGV-1796374_23	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1796374_23	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1796374_23	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1796374_24	eggNOG-mapper	706433.HMPREF9430_01275	NA	NA
UHGV-1796374_24	Structural annotation	PF04545, MF_00674, TIGR01636, COG1191	NA	NA