| Genome information | |
|---|---|
| Genome ID | UHGV-1890976 |
| vOTU ID | vOTU-014842 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 2051223007|mhc6b_MHC6B_contig01213|provirus_23959_40037 |
| BioSample | NA |
| Country | Sweden |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 16.20% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 5 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.8864 |
| Virus hallmark genes (geNomad) | 7 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 16 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 11,921 bps |
| GC content | 44.40% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 19 |
| CDS density | 96.88% |
| Average CDS length | 616.11 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |