| Genome information | |
|---|---|
| Genome ID | UHGV-1939829 |
| vOTU ID | vOTU-041114 |
| vOTU representative | Yes |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300006502|Ga0100528_100065|provirus_538_23376 |
| BioSample | NA |
| Country | Unknown |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 30.83% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 4 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9594 |
| Virus hallmark genes (geNomad) | 0 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | -1.46 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 22,839 bps |
| GC content | 41.68% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 15 |
| CDS density | 91.94% |
| Average CDS length | 1,400.80 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |