| Genome information | |
|---|---|
| Genome ID | UHGV-1966754 |
| vOTU ID | vOTU-068239 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300014940|Ga0169849_100122|provirus_21519_77657 |
| BioSample | SAMEA2580261 |
| Country | Denmark |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 72.37% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 13 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9756 |
| Virus hallmark genes (geNomad) | 7 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 27.96 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 52,227 bps |
| GC content | 38.65% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 62 |
| CDS density | 92.66% |
| Average CDS length | 783.10 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |