| Genome information | |
|---|---|
| Genome ID | UHGV-1969282 |
| vOTU ID | vOTU-041241 |
| vOTU representative | Yes |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300014963|Ga0134523_1002255|provirus_4989_23832 |
| BioSample | SAMN04158624 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 16.09% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 6 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.8452 |
| Virus hallmark genes (geNomad) | 8 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 10.51 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 12,330 bps |
| GC content | 42.65% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 18 |
| CDS density | 96.04% |
| Average CDS length | 661.67 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |