| Genome information | |
|---|---|
| Genome ID | UHGV-1969330 |
| vOTU ID | vOTU-015369 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300014938|Ga0134444_100273|provirus_227_13056 |
| BioSample | SAMN03922524 |
| Country | Germany |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 21.49% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 7 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9801 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 18.12 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 12,830 bps |
| GC content | 59.14% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 18 |
| CDS density | 92.16% |
| Average CDS length | 662.00 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |