| Genome information | |
|---|---|
| Genome ID | UHGV-1972589 |
| vOTU ID | vOTU-063050 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300015155|Ga0183235_117247|provirus_3065_46404 |
| BioSample | NA |
| Country | Bangladesh |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 77.19% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 33 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9735 |
| Virus hallmark genes (geNomad) | 9 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 94.78 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 38,830 bps |
| GC content | 37.49% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 51 |
| CDS density | 90.15% |
| Average CDS length | 689.59 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |