| Genome information | |
|---|---|
| Genome ID | UHGV-1980732 |
| vOTU ID | vOTU-014944 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300014963|Ga0134523_1000160|provirus_11891_45292 |
| BioSample | SAMN04158624 |
| Country | United States |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 54.92% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 18 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9784 |
| Virus hallmark genes (geNomad) | 9 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 59.7 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 33,402 bps |
| GC content | 51.46% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 48 |
| CDS density | 93.20% |
| Average CDS length | 651.56 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |