| Genome information | |
|---|---|
| Genome ID | UHGV-1997558 |
| vOTU ID | vOTU-019376 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300023718|Ga0257036_10937|provirus_3220_15153 |
| BioSample | NA |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 17.93% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 2 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9387 |
| Virus hallmark genes (geNomad) | 0 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 0.76 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 11,934 bps |
| GC content | 52.77% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 21 |
| CDS density | 76.76% |
| Average CDS length | 442.14 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |