| Genome information | |
|---|---|
| Genome ID | UHGV-2016968 |
| vOTU ID | vOTU-041458 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029198|Ga0168723_100424|provirus_35255_48428 |
| BioSample | SAMEA2737704 |
| Country | China |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 28.70% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 2 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9483 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | -6.76 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 13,174 bps |
| GC content | 50.65% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 22 |
| CDS density | 89.47% |
| Average CDS length | 537.68 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |