| Genome information | |
|---|---|
| Genome ID | UHGV-2022624 |
| vOTU ID | vOTU-015007 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029209|Ga0168673_100271|provirus_14403_56422 |
| BioSample | SAMEA2737654 |
| Country | China |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 50.25% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 5 |
| CheckV host markers | 5 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9339 |
| Virus hallmark genes (geNomad) | 8 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 3.82 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 42,020 bps |
| GC content | 55.13% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 55 |
| CDS density | 91.05% |
| Average CDS length | 697.26 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |