| Genome information | |
|---|---|
| Genome ID | UHGV-2040364 |
| vOTU ID | vOTU-017435 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029360|Ga0243814_1000155|provirus_116630_128998 |
| BioSample | SAMN05971521 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 24.91% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9364 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | -1.04 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 12,369 bps |
| GC content | 54.57% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 21 |
| CDS density | 82.38% |
| Average CDS length | 487.86 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |