| Genome information | |
|---|---|
| Genome ID | UHGV-2045784 |
| vOTU ID | vOTU-010200 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029331|Ga0243780_100054|provirus_174354_222756 |
| BioSample | SAMN05971486 |
| Country | United States |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 53.61% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 14 |
| CheckV host markers | 5 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9678 |
| Virus hallmark genes (geNomad) | 8 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | -6.19 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 48,403 bps |
| GC content | 43.98% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 49 |
| CDS density | 94.76% |
| Average CDS length | 940.16 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |