| Genome information | |
|---|---|
| Genome ID | UHGV-2052342 |
| vOTU ID | vOTU-001898 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029339|Ga0242823_1000373|provirus_1_74234 |
| BioSample | SAMN05545071 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 74.17% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 19 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9707 |
| Virus hallmark genes (geNomad) | 6 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Plasmid |
| viralVerify score | 19.8 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 74,234 bps |
| GC content | 37.53% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 99 |
| CDS density | 88.27% |
| Average CDS length | 663.76 bps |
| tRNA count | 8 |
| Suppressor tRNA genes | 0 |