| Genome information | |
|---|---|
| Genome ID | UHGV-2068664 |
| vOTU ID | vOTU-015673 |
| vOTU representative | No |
| Source dataset | IMG/VR v4 |
| Original genome ID | 3300029406|Ga0242805_100010|provirus_223943_315368 |
| BioSample | SAMN05545052 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 88.25% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 18 |
| CheckV host markers | 10 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9623 |
| Virus hallmark genes (geNomad) | 14 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Plasmid |
| viralVerify score | 18.05 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 87,029 bps |
| GC content | 42.72% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 96 |
| CDS density | 89.45% |
| Average CDS length | 813.66 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |